RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 SAP25Q8TEE9 199 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 BSCL2Q96G97 398 aaPredicted RBP2.74□□□□□ -1.97
LINC00616-202ENST00000505874 CCM2Q9BSQ5 444 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 VNN3Q9NY84 501 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 ADAM22Q9P0K1 906 aa2.74□□□□□ -1.97
LINC00616-202ENST00000505874 RCOR3Q9P2K3 495 aaPredicted RBP2.74□□□□□ -1.97
LINC00616-202ENST00000505874 PRDM2Q13029 1718 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ANKDD1BA6NHY2 528 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 SAP18O00422 153 aaKnown RBP2.73□□□□□ -1.97
LINC00616-202ENST00000505874 GRAP2O75791 330 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 FHP07954 510 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 VIMP08670 466 aaKnown RBP2.73□□□□□ -1.97
LINC00616-202ENST00000505874 FAM58BPP0C7Q3 252 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ODC1P11926 461 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 GDF1P27539 372 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 KRT20P35900 424 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 PRKCIP41743 596 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 FHITP49789 147 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 RAD23AP54725 363 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 GSTO1P78417 241 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 FOLH1Q04609 750 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 CDO1Q16878 200 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 CNPY1Q3B7I2 92 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 C1orf141Q5JVX7 400 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 LYPLAL1Q5VWZ2 237 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ANKRD46Q86W74 232 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 TIGD4Q8IY51 512 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF491Q8N8L2 437 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 RNF149Q8NC42 400 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 TBCKQ8TEA7 893 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 CDHR1Q96JP9 859 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 CNDP2Q96KP4 475 aaKnown RBP2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF285Q96NJ3 590 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF665Q9H7R5 613 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 VIPAS39Q9H9C1 493 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF446Q9NWS9 450 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 NKIRAS2Q9NYR9 191 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ZNF319Q9P2F9 582 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 ETV7Q9Y603 341 aa2.73□□□□□ -1.97
LINC00616-202ENST00000505874 CFTRP13569 1480 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 DUSP11O75319 330 aaKnown RBP2.72□□□□□ -1.97
LINC00616-202ENST00000505874 GJB2P29033 226 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 TIA1P31483 386 aaKnown RBP eCLIP2.72□□□□□ -1.97
LINC00616-202ENST00000505874 KHDRBS2Q5VWX1 349 aaKnown RBP2.72□□□□□ -1.97
LINC00616-202ENST00000505874 PM20D1Q6GTS8 502 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 DZIP1Q86YF9 867 aaKnown RBP2.72□□□□□ -1.97
LINC00616-202ENST00000505874 CCDC191Q8NCU4 936 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 Q8NFD4 153 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 NTNG2Q96CW9 530 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 ERGIC2Q96RQ1 377 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 SDHCQ99643 169 aaPredicted RBP2.72□□□□□ -1.97
LINC00616-202ENST00000505874 FERMT1Q9BQL6 677 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 PAXXQ9BUH6 204 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 MINDY3Q9H8M7 445 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 PLSCR3Q9NRY6 295 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 RNF24Q9Y225 148 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 EXOC6BQ9Y2D4 811 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 NTNG1Q9Y2I2 539 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 LAMC3Q9Y6N6 1575 aa2.72□□□□□ -1.97
LINC00616-202ENST00000505874 TDRD6O60522 2096 aaKnown RBP2.72□□□□□ -1.97
LINC00616-202ENST00000505874 HTR3EA5X5Y0 456 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 C5orf52A6NGY3 159 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 SELENOFO60613 162 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 CSO75390 466 aaKnown RBP2.71□□□□□ -1.98
LINC00616-202ENST00000505874 CLN5O75503 358 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 OR6A2O95222 327 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 ELK1P19419 428 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 TNFRSF4P43489 277 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 NPBWR1P48145 328 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 FNTAP49354 379 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 CAPZA1P52907 286 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 FKBP1BP68106 108 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 CXCL6P80162 114 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 C9orf129Q5T035 196 aaKnown RBP2.71□□□□□ -1.98
LINC00616-202ENST00000505874 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 ALKBH5Q6P6C2 394 aaKnown RBP2.71□□□□□ -1.98
LINC00616-202ENST00000505874 ABRAXAS1Q6UWZ7 409 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 UBQLNLQ8IYU4 475 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 LSMEM1Q8N8F7 131 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 ZNF671Q8TAW3 534 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 U2AF1L4Q8WU68 220 aaKnown RBP2.71□□□□□ -1.98
LINC00616-202ENST00000505874 SGF29Q96ES7 293 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 SIPA1Q96FS4 1042 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 OR10A4Q9H209 315 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 AMBNQ9NP70 447 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 PFDN4Q9NQP4 134 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 ANAPC5Q9UJX4 755 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 PLEKHA6Q9Y2H5 1048 aa2.71□□□□□ -1.98
LINC00616-202ENST00000505874 PFASO15067 1338 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 ABCC8Q09428 1581 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 PDS5BQ9NTI5 1447 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 CCDC159P0C7I6 412 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 HSD17B1P14061 328 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 FOSL2P15408 326 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 CD1EP15812 388 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 SLC25A1P53007 311 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 ERVPABLB-1P60509 514 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 SLC17A1Q14916 467 aa2.7□□□□□ -1.98
LINC00616-202ENST00000505874 C14orf28Q4W4Y0 310 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms