RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	FAM220BP	B1ANY3	271 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840		H0Y626	953 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	PIGR	P01833	764 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	DRD3	P35462	400 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	IER3	P46695	156 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	FHIT	P49789	147 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	LTB4R	Q15722	352 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	RAPH1	Q70E73	1250 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	SEPT8	Q92599	483 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	BSCL2	Q96G97	398 aa	Predicted RBP	4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	JAKMIP1	Q96N16	626 aa	Known RBP	4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	RANBP9	Q96S59	729 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	ZBP1	Q9H171	429 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	GPR173	Q9NS66	373 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	FBXO7	Q9Y3I1	522 aa		4.25	□□□□□ -1.73
TARDBP-210	ENST00000496840	SRRM4	A7MD48	611 aa	Known RBP	4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	SKIL	P12757	684 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	PPP2R1A	P30153	589 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	BRCC3	P46736	316 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	FOLH1	Q04609	750 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	C17orf58	Q2M2W7	97 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	VASH2	Q86V25	355 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	CACUL1	Q86Y37	369 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	CKAP2	Q8WWK9	683 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	DNASE1L2	Q92874	299 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	ARMCX1	Q9P291	453 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	GMEB2	Q9UKD1	530 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	IKZF3	Q9UKT9	509 aa		4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	NOL7	Q9UMY1	257 aa	Known RBP	4.24	□□□□□ -1.73
TARDBP-210	ENST00000496840	TRAV9-2	A0A087WT02	112 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	CCDC162P	A2VCL2	907 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	TMCO5B	A8MYB1	307 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	ZNF19	P17023	458 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	MUT	P22033	750 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	ADAR	P55265	1226 aa	Known RBP	4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	CAPRIN1	Q14444	709 aa	Known RBP	4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	TTC31	Q49AM3	519 aa	Predicted RBP	4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	SLC22A6	Q4U2R8	563 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	PM20D1	Q6GTS8	502 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	SMYD1	Q8NB12	490 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	GPR148	Q8TDV2	347 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	NTNG2	Q96CW9	530 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	ZNF274	Q96GC6	653 aa	Predicted RBP	4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	CDHR1	Q96JP9	859 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	SLCO1C1	Q9NYB5	712 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	ZNF319	Q9P2F9	582 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	PRO0461	Q9UI25	63 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	ITGA11	Q9UKX5	1188 aa		4.23	□□□□□ -1.73
TARDBP-210	ENST00000496840	ZNF487	B1APH4	448 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	KBTBD13	C9JR72	458 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	CCS	O14618	274 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	WDR46	O15213	610 aa	Known RBP	4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	B4GAT1	O43505	415 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	FH	P07954	510 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	ATP6V1B1	P15313	513 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	CHRNA3	P32297	505 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	TNNT3	P45378	269 aa	Predicted RBP	4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	SCN1B	Q07699	218 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	PTK6	Q13882	451 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	TMEM64	Q6YI46	380 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	CCDC71	Q8IV32	467 aa	Predicted RBP	4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	SAMD12	Q8N8I0	201 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	EXOC4	Q96A65	974 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	PPP1R16A	Q96I34	528 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	C17orf62	Q9BQA9	187 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	MLPH	Q9BV36	600 aa	Predicted RBP	4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	LSG1	Q9H089	658 aa	Known RBP	4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	MRPL17	Q9NRX2	175 aa	Known RBP	4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840		Q9UF83	564 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	TMED7	Q9Y3B3	224 aa		4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.22	□□□□□ -1.73
TARDBP-210	ENST00000496840	FAM205A	Q6ZU69	1335 aa		4.21	□□□□□ -1.73
TARDBP-210	ENST00000496840	GTPBP10	A4D1E9	387 aa	Known RBP	4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	YDJC	A8MPS7	323 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	NEDD8-MDP1	E9PL57	170 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	CCER2	I3L3R5	266 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840		M0R296	226 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	SLC30A4	O14863	429 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	TGDS	O95455	350 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	LYN	P07948	512 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	OR9G9	P0C7N8	305 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	CAST	P20810	708 aa	Known RBP	4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	FKBP1B	P68106	108 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	ZNF79	Q15937	498 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	SIX6OS1	Q8N1H7	587 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	GTSF1	Q8WW33	167 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	DESI2	Q9BSY9	194 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	TEX13B	Q9BXU2	312 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	NT5DC2	Q9H857	520 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	MIS18A	Q9NYP9	233 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	GPR132	Q9UNW8	380 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840	ETV7	Q9Y603	341 aa		4.21	□□□□□ -1.74
TARDBP-210	ENST00000496840		A4D1N5	150 aa		4.2	□□□□□ -1.74
TARDBP-210	ENST00000496840	IFIT3	O14879	490 aa	Known RBP	4.2	□□□□□ -1.74
TARDBP-210	ENST00000496840	CSDE1	O75534	798 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms