RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ATP1A1-AS1Q5TC04 95 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 FAM72AQ5TYM5 149 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 ZNF776Q68DI1 518 aaPredicted RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 FAM72DQ6L9T8 149 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 SLC25A24Q6NUK1 477 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 TAF8Q7Z7C8 310 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 FAM72BQ86X60 149 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 THEM5Q8N1Q8 247 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 SLC43A2Q8N370 569 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 ADAD2Q8NCV1 583 aaKnown RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 TRPV3Q8NET8 790 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 OR52K2Q8NGK3 314 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 C11orf45Q8TAV5 145 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 CASP10Q92851 521 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 MRPL53Q96EL3 112 aaKnown RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 LRR1Q96L50 414 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 SAMD8Q96LT4 415 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 CFAP53Q96M91 514 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 NKX3-1Q99801 234 aaPredicted RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 THUMPD2Q9BTF0 503 aaKnown RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 NACAP1Q9BZK3 213 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 FAM49AQ9H0Q0 323 aaPredicted RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 MTIF3Q9H2K0 278 aaKnown RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 VPS37BQ9H9H4 285 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 ZCCHC3Q9NUD5 404 aaKnown RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 PLCXD1Q9NUJ7 323 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 EXOC1Q9NV70 894 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.18□□□□□ -1.9
CLK1-214ENST00000496205 ANKMY1Q9P2S6 941 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 RABL2AQ9UBK7 228 aaPredicted RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 CACNG5Q9UF02 275 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 PLCL2Q9UPR0 1127 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 PLEKHA6Q9Y2H5 1048 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 MRPS28Q9Y2Q9 187 aaKnown RBP3.18□□□□□ -1.9
CLK1-214ENST00000496205 UBE4BO95155 1302 aa3.18□□□□□ -1.9
CLK1-214ENST00000496205 C2orf92A0A1B0GVN3 265 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 ATP6AP2A0A1C7CYW4 349 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 SH3PXD2BA1X283 911 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 C15orf61A6NNL5 157 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TMEM110-MUSTN1A8MSY1 372 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 A8MU76 341 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 H0YCG3 227 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 B4GAT1O43505 415 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 SYT7O43581 403 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 CCDC159P0C7I6 412 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TSPY4P0CV99 314 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TSPY10P0CW01 314 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 PRG2P13727 222 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 EZRP15311 586 aaKnown RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 ZNF26P17031 533 aaPredicted RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 AADACP22760 399 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 ACKR3P25106 362 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 CHRNA3P32297 505 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 PITPNBP48739 271 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 CNN1P51911 297 aaKnown RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 GBX2P52951 348 aaPredicted RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 KRTAP10-8P60410 259 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 SRP54P61011 504 aaKnown RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 GALK2Q01415 458 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 CNTN1Q12860 1018 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 LCP2Q13094 533 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TMED1Q13445 227 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 RIPK1Q13546 671 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 SPHARQ15513 63 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TAB1Q15750 504 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 FAM106AQ4KMX7 169 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 SPATA46Q5T0L3 261 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 PLPP4Q5VZY2 271 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 BSPRYQ5W0U4 402 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 RAET1GQ6H3X3 334 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 IRGCQ6NXR0 463 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 ARHGAP11AQ6P4F7 1023 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TRIM65Q6PJ69 517 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TMEM64Q6YI46 380 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 RUFY3Q7L099 469 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 ADAMTSL2Q86TH1 951 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 OTUD6BQ8N6M0 293 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TMEM99Q8N816 258 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 NIPA2Q8N8Q9 360 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 CNBD1Q8NA66 436 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 BRSK1Q8TDC3 778 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 ATP8B4Q8TF62 1192 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 THRSPQ92748 146 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 RAB7BQ96AH8 199 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 MRPL38Q96DV4 380 aaKnown RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 GMPPAQ96IJ6 420 aaPredicted RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 LURAP1Q96LR2 239 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 ZNF300Q96RE9 604 aaPredicted RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 PCDHB18PQ96TA0 734 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 FAM213AQ9BRX8 229 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TBCDQ9BTW9 1192 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 NUSAP1Q9BXS6 441 aaKnown RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 NAPBQ9H115 298 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TMEM245Q9H330 911 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 NCOR1P1Q9H4R4 102 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 GPN1Q9HCN4 374 aaPredicted RBP3.17□□□□□ -1.9
CLK1-214ENST00000496205 TMOD2Q9NZR1 351 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 UBQLN2Q9UHD9 624 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 PPP1R3CQ9UQK1 317 aa3.17□□□□□ -1.9
CLK1-214ENST00000496205 TCF19Q9Y242 345 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms