RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FADS2P1A8MWK0 482 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 SGTAO43765 313 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 TBL1XO60907 577 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 TMCC2O75069 709 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 HIST1H2AGP0C0S8 130 aaPredicted RBP14.64□□□□□ -0.07
SDF4-207ENST00000494748 HIST1H2ADP20671 130 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 APEX1P27695 318 aaKnown RBP14.64□□□□□ -0.07
SDF4-207ENST00000494748 ETV5P41161 510 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 ETV1P50549 477 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 PTSQ03393 145 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 FOXD4Q12950 439 aaPredicted RBP14.64□□□□□ -0.07
SDF4-207ENST00000494748 HSDL2Q6YN16 418 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 C11orf74Q86VG3 221 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 THOC6Q86W42 341 aaKnown RBP14.64□□□□□ -0.07
SDF4-207ENST00000494748 HIST1H2AHQ96KK5 128 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 HIST1H2AJQ99878 128 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 FUZQ9BT04 418 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 H2AFJQ9BTM1 129 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 MED18Q9BUE0 208 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 TESQ9UGI8 421 aaKnown RBP14.64□□□□□ -0.07
SDF4-207ENST00000494748 LEUTXA8MZ59 168 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 ADAM12O43184 909 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 TRIM3O75382 744 aaPredicted RBP14.64□□□□□ -0.07
SDF4-207ENST00000494748 ARAFP10398 606 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 HSD3B1P14060 373 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 LHCGRP22888 699 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 HSD3B2P26439 372 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 TIA1P31483 386 aaKnown RBP eCLIP14.64□□□□□ -0.076e-7■■□□□ 14.5
SDF4-207ENST00000494748 SDC2P34741 201 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 MAN2A2P49641 1150 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 AP1S2P56377 157 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 SNRPD2P62316 118 aaKnown RBP14.64□□□□□ -0.07
SDF4-207ENST00000494748 QPRTQ15274 297 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 KIAA1841Q6NSI8 718 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 DPY19L3Q6ZPD9 716 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 OTOP2Q7RTS6 562 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 VPS37AQ8NEZ2 397 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 TSSK6Q9BXA6 273 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 CKAP5Q14008 2032 aa14.64□□□□□ -0.07
SDF4-207ENST00000494748 SMIM30A4D0T7 59 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 EOMESO95936 686 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 ADAP00813 363 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 HMGA1P17096 107 aaKnown RBP14.63□□□□□ -0.07
SDF4-207ENST00000494748 NUDT1P36639 197 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 MC1RQ01726 317 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 BCL2L1Q07817 233 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 PDE7AQ13946 482 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 BTBD16Q32M84 506 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 HECTD3Q5T447 861 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 MFSD14CQ5VZR4 134 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 ANGPTL8Q6UXH0 198 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 OR52I1Q8NGK6 324 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 TM9SF4Q92544 642 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 GTPBP2Q9BX10 602 aaKnown RBP14.63□□□□□ -0.07
SDF4-207ENST00000494748 UCK2Q9BZX2 261 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 PLOD3O60568 738 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 ACADMP11310 421 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 P2RY14Q15391 338 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 PYDC2Q56P42 97 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 PDZK1Q5T2W1 519 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 ZNF730Q6ZMV8 503 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 GLRX5Q86SX6 157 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 TRIM69Q86WT6 500 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 GPR156Q8NFN8 814 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 GPR32P1Q8NGA4 272 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 OR5AK3PQ8NH89 298 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 SKA2Q8WVK7 121 aaPredicted RBP14.63□□□□□ -0.07
SDF4-207ENST00000494748 FOXJ1Q92949 421 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 WFDC6Q9BQY6 131 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 TRAV19A0A0A6YYK7 116 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 SHOXO15266 292 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 GREM1O60565 184 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 AP2A2O94973 939 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 TSPAN19P0C672 248 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 IFNA8P32881 189 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 MAP2K3P46734 347 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 SLC9A3P48764 834 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 ATN1P54259 1190 aaPredicted RBP14.63□□□□□ -0.07
SDF4-207ENST00000494748 CLDN20P56880 219 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 RPS25P62851 125 aaKnown RBP14.63□□□□□ -0.07
SDF4-207ENST00000494748 OCLNQ16625 522 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 CCSMST1Q4G0I0 132 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 CREB3L2Q70SY1 520 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 TAS1R1Q7RTX1 841 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 PDZD3Q86UT5 571 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 KLHDC8AQ8IYD2 350 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 CELF5Q8N6W0 485 aaKnown RBP14.63□□□□□ -0.07
SDF4-207ENST00000494748 OR7G3Q8NG95 312 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 OR9Q1Q8NGQ5 310 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 TMEM203Q969S6 136 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 RBFOX1Q9NWB1 397 aaKnown RBP14.63□□□□□ -0.07
SDF4-207ENST00000494748 SLC23A1Q9UHI7 598 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 MAP4K5Q9Y4K4 846 aa14.63□□□□□ -0.07
SDF4-207ENST00000494748 ARHGEF33A8MVX0 844 aa14.62□□□□□ -0.07
SDF4-207ENST00000494748 SOCS5O75159 536 aa14.62□□□□□ -0.07
SDF4-207ENST00000494748 ELAVL4P26378 380 aaKnown RBP14.62□□□□□ -0.07
SDF4-207ENST00000494748 STK19P49842 368 aaPredicted RBP14.62□□□□□ -0.07
SDF4-207ENST00000494748 EFNB1P98172 346 aa14.62□□□□□ -0.07
SDF4-207ENST00000494748 CCDC28AQ8IWP9 274 aa14.62□□□□□ -0.07
SDF4-207ENST00000494748 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.62□□□□□ -0.072e-7■■■■■ 38.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms