RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RORBQ92753 470 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 RPL3LQ92901 407 aaKnown RBP13.13□□□□□ -0.31
VCP-207ENST00000493886 SLC35A5Q9BS91 424 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 SLC17A9Q9BYT1 436 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 ASPSCR1Q9BZE9 553 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 GPATCH2Q9NW75 528 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 RAPGEFL1Q9UHV5 662 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 KCNK6Q9Y257 313 aa13.13□□□□□ -0.31
VCP-207ENST00000493886 H7BY64 318 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PLPP1O14494 284 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PLRG1O43660 514 aaKnown RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 SULT1C4O75897 302 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 MT-ND2P03891 347 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CDH3P22223 829 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CRATP43155 626 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 DAPP51397 102 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 MVDP53602 400 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 REEP5Q00765 189 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 OCA2Q04671 838 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 MLF2Q15773 248 aaPredicted RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 NPTX1Q15818 432 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PRSS53Q2L4Q9 553 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 ADPRMQ3LIE5 342 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 COX20Q5RI15 118 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 KHDRBS2Q5VWX1 349 aaKnown RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 KIAA1161Q6NSJ0 714 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 IKBIPQ70UQ0 350 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 LINC01555Q8NAE3 123 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 C11orf65Q8NCR3 313 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 SH3YL1Q96HL8 342 aaPredicted RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 TPD52L3Q96J77 140 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CNDP2Q96KP4 475 aaKnown RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 PRAP1Q96NZ9 151 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 TIMM29Q9BSF4 260 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 MS4A8Q9BY19 250 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 POLE4Q9NR33 117 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 KIF17Q9P2E2 1029 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CCDC88CQ9P219 2028 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 FEZF1A0PJY2 475 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 ZSCAN5BA6NJL1 495 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 M0R3G1 203 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 RNGTTO60942 597 aaKnown RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 SEMA3DO95025 777 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 NADKO95544 446 aaPredicted RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 DNTTP04053 509 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CEACAM5P06731 702 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CLK3P49761 638 aaKnown RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 ADAM15Q13444 863 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 DNASE1L3Q13609 305 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 Q6ZPB1 254 aaPredicted RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 DGLUCYQ7Z3D6 616 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 MMP21Q8N119 569 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PIK3C3Q8NEB9 887 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CHPT1Q8WUD6 406 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PMEPA1Q969W9 287 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 TAMM41Q96BW9 452 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 F2RL3Q96RI0 385 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 AMBNQ9NP70 447 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 MIEF1Q9NQG6 463 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 GMPPBQ9Y5P6 360 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 TICRRQ7Z2Z1 1910 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 RTCAO00442 366 aaKnown RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 SNPHO15079 494 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 ETFAP13804 333 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 IGFALSP35858 605 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 MASP1P48740 699 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 CRYBA2P53672 197 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 GABARAPL2P60520 117 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 TEAD4Q15561 434 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 ATG16L2Q8NAA4 619 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 ZNF540Q8NDQ6 660 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 OR7G1Q8NGA0 311 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 OR52N2Q8NGI0 321 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 FAM131CQ96AQ9 280 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 GABRG3Q99928 467 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 ZNF717Q9BY31 904 aaPredicted RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 SLC6A16Q9GZN6 736 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PALMDQ9NP74 551 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
VCP-207ENST00000493886 TAS2R9Q9NYW1 312 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 ACSL6Q9UKU0 697 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 SLC17A4Q9Y2C5 497 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 PLEKHM1Q9Y4G2 1056 aa13.12□□□□□ -0.31
VCP-207ENST00000493886 F5P12259 2224 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 A0A1W2PRB8 838 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 CLDN25C9JDP6 229 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 MAT2AP31153 395 aaKnown RBP13.11□□□□□ -0.31
VCP-207ENST00000493886 ADPRHP54922 357 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 RFX4Q33E94 735 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 SDE2Q6IQ49 451 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 AHSA2Q719I0 299 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 HORMAD1Q86X24 394 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 RIPOR3Q96MK2 946 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 CAMK1GQ96NX5 476 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 BTBD1Q9H0C5 482 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 FZD3Q9NPG1 666 aa13.11□□□□□ -0.31
VCP-207ENST00000493886 ADPRHL2Q9NX46 363 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms