RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 OR4Q2P0C623 313 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 SLC6A1P30531 599 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 RGS4P49798 205 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 DSTNP60981 165 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 FABP5Q01469 135 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 CSTF1Q05048 431 aaKnown RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 SRSF11Q05519 484 aaKnown RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 INSL4Q14641 139 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ATXN7L2Q5T6C5 722 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 BHLHB9Q6PI77 547 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 MS4A15Q8N5U1 240 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 NPLOC4Q8TAT6 608 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 CMTM7Q96FZ5 175 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ZSWIM3Q96MP5 696 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 ZNF578Q96N58 590 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-210ENST00000493582 NUDT15Q9NV35 164 aa11.17□□□□□ -0.62
HDAC4-210ENST00000493582 A0A1W2PPL8 197 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 GABRR3A8MPY1 467 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 HEPACAM2A8MVW5 462 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ANKRD66B4E2M5 251 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 CBX4O00257 560 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 TNFRSF10BO14763 440 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PI15O43692 258 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ACSM4P0C7M7 580 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ODC1P11926 461 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 CPEP16870 476 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 STOMP27105 288 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 RAB8AP61006 207 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PUDPQ08623 228 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 IKZF1Q13422 519 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 VGLL4Q14135 290 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 GPR68Q15743 365 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 NDUFAF5Q5TEU4 345 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 BICRALQ6AI39 1079 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 UNC5DQ6UXZ4 953 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 CEACAM20Q6UY09 585 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 RTL4Q6ZR62 310 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 RNF165Q6ZSG1 346 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 KANSL1Q7Z3B3 1105 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 HDDC2Q7Z4H3 204 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 TAGAPQ8N103 731 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 TTLQ8NG68 377 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 OR6M1Q8NGM8 313 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PKP4Q99569 1192 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PIP5K1AQ99755 562 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 GSX2Q9BZM3 304 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 WASH6PQ9NQA3 447 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 FLRT1Q9NZU1 646 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ATPIF1Q9UII2 106 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 RPL36Q9Y3U8 105 aaKnown RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 KHNYNO15037 678 aaKnown RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 INSIG1O15503 277 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 B3GAT3O94766 335 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 THP07101 528 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PROS1P07225 676 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ANXA3P12429 323 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PTX3P26022 381 aaPredicted RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 MAPK1P28482 360 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PCGF2P35227 344 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 BDKRB1P46663 353 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 CRYZQ08257 329 aaKnown RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 MEDAGQ5VYS4 303 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 METTL2BQ6P1Q9 378 aaKnown RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 FAM151BQ6UXP7 276 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 FAM9CQ8IZT9 166 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 C7orf57Q8NEG2 295 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 OR8K5Q8NH50 307 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 NFKBIDQ8NI38 313 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ATF6BQ99941 703 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ACBD6Q9BR61 282 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 DUSP26Q9BV47 211 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 MROH8Q9H579 483 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PDFQ9HBH1 243 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PPIEQ9UNP9 301 aaKnown RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 KCNMB2Q9Y691 235 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 IGLV3-10A0A075B6K4 115 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 TRBV4-1A0A0J9YWV2 114 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 TLX2O43763 284 aaPredicted RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 HK1P19367 917 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 VSX2P58304 361 aaPredicted RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 DDX39BQ13838 428 aaKnown RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ZNF273Q14593 569 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PLK5Q496M5 336 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ADGRF3Q8IZF5 1079 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 IQCF1Q8N6M8 205 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 KLHDC9Q8NEP7 349 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 EID2BQ96D98 161 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 FERD3LQ96RJ6 166 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 HTATIP2Q9BUP3 242 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ABCG5Q9H222 651 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 GHITMQ9H3K2 345 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 PRM3Q9NNZ6 103 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ARL15Q9NXU5 204 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 MRPL39Q9NYK5 338 aaKnown RBP11.16□□□□□ -0.62
HDAC4-210ENST00000493582 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
HDAC4-210ENST00000493582 SHISA3A0PJX4 238 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms