RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 HAS2Q92819 552 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 TANKQ92844 425 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 DAZLQ92904 295 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 SMC6Q96SB8 1091 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 TRIM4Q9C037 500 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 RPF2Q9H7B2 306 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 WDR41Q9HAD4 459 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 MID1IP1Q9NPA3 183 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 VTI1BQ9UEU0 232 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 SLC12A4Q9UP95 1085 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 PLLPQ9Y342 182 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 ASB4Q9Y574 426 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 PCDHGA10Q9Y5H3 936 aa9.97□□□□□ -0.81
CDC42SE1-206ENST00000492796 NAV2Q8IVL1 2488 aa9.96□□□□□ -0.81
CDC42SE1-206ENST00000492796 TRAV17A0A0B4J275 112 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 ARHGAP10A1A4S6 786 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 SERTM1A2A2V5 107 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 OR5H15A6NDH6 313 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 A8MUI8 341 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 TGFBR3LH3BV60 316 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 MANBAO00462 879 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 PROM1O43490 865 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 TMPRSS11DO60235 418 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 LDB3O75112 727 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 ULK1O75385 1050 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 ERLIN1O75477 346 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 EEDO75530 441 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 MYO1DO94832 1006 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 WISP1O95388 367 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 FAM58BPP0C7Q3 252 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 NR2F6P10588 404 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 TNFSF10P50591 281 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 CLCN2P51788 898 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 NAGLUP54802 743 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 MLLT10P55197 1068 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 IGLV3-21P80748 117 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 FOXK1P85037 733 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 ZNF844Q08AG5 666 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 PCLAFQ15004 111 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 PLEKHN1Q494U1 663 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 SGO1Q5FBB7 561 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 COLEC12Q5KU26 742 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 ACER2Q5QJU3 275 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 CUZD1Q86UP6 607 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 CRLF3Q8IUI8 442 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 HOMEZQ8IX15 550 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 APCDD1LQ8NCL9 501 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 MIB2Q96AX9 1013 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 VMP1Q96GC9 406 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 CNDP1Q96KN2 507 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 PELOQ9BRX2 385 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 TRMOQ9BU70 441 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 MRPL1Q9BYD6 325 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 ALOXE3Q9BYJ1 711 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 PNO1Q9NRX1 252 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 FARSBQ9NSD9 589 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 ATG4BQ9Y4P1 393 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 CSAG2Q9Y5P2 127 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 CLCA3PQ9Y6N3 262 aa9.96□□□□□ -0.82
CDC42SE1-206ENST00000492796 A8MUA0 341 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 UBFD1O14562 309 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 RGS16O15492 202 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 FGF17O60258 216 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 TRIM13O60858 407 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 GUCY1B2O75343 617 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 CRCPO75575 148 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 AIFM1O95831 613 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 WDPCPO95876 746 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 IFNA16P05015 189 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 COX7A2P14406 83 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 TPP2P29144 1249 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 DEKP35659 375 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 STT3AP46977 705 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 TRA2BP62995 288 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 PLIN5Q00G26 463 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 GALNT1Q10472 559 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 TBL3Q12788 808 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 INPP5JQ15735 1006 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 INAQ16352 499 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 SPIN4Q56A73 249 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 TCHHL1Q5QJ38 904 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 CCNYL2Q5T2Q4 361 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 C18orf63Q68DL7 685 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 OR52E8Q6IFG1 317 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 RPUSD3Q6P087 351 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 COMMD6Q7Z4G1 85 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 ATCAYQ86WG3 371 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 RPS19BP1Q86WX3 136 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 C10orf107Q8IVU9 208 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 BEST3Q8N1M1 668 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 ARMC10Q8N2F6 343 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 MORN4Q8NDC4 146 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 SUN3Q8TAQ9 357 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 TCP10LQ8TDR4 215 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 SREK1Q8WXA9 508 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 NCLNQ969V3 563 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 ANKRD9Q96BM1 317 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 DGAT2Q96PD7 388 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 FAM111AQ96PZ2 611 aa9.95□□□□□ -0.82
CDC42SE1-206ENST00000492796 DEFB126Q9BYW3 111 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms