RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 AIFM1O95831 613 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CHRNGP07510 517 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 PPP2R1BP30154 601 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SOX11P35716 441 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SERPINB5P36952 375 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MAPK12P53778 367 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 HMGCS1Q01581 520 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SERTAD2Q14140 314 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 IMPG1Q17R60 797 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CRB2Q5IJ48 1285 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CCNYL2Q5T2Q4 361 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CLEC6AQ6EIG7 209 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SCIMPQ6UWF3 145 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 NUDCD3Q8IVD9 361 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SIRT6Q8N6T7 355 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 AMER2Q8N7J2 671 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TEX19Q8NA77 164 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CHTF18Q8WVB6 975 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 PSMF1Q92530 271 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TANKQ92844 425 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 PKNOX2Q96KN3 472 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ALOXE3Q9BYJ1 711 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 EPS8L2Q9H6S3 715 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 WDR41Q9HAD4 459 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 EML4Q9HC35 981 aaKnown RBP15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ADAP2Q9NPF8 381 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 PTGFRNQ9P2B2 879 aa15.24■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 AZIN1O14977 448 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 FGF17O60258 216 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MYO1DO94832 1006 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 IFNA16P05015 189 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SERPINB3P29508 390 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ID2Q02363 134 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MFAP5Q13361 173 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TERF2Q15554 542 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ELAVL1Q15717 326 aaKnown RBP15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SPIN4Q56A73 249 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ARL13AQ5H913 290 aaPredicted RBP15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 IGFL2Q6UWQ7 119 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 IGFL3Q6UXB1 125 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ISLR2Q6UXK2 745 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 C7orf57Q8NEG2 295 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 PPP1R14CQ8TAE6 165 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ANKRD9Q96BM1 317 aaPredicted RBP15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 KCNK13Q9HB14 408 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ZBTB20Q9HC78 741 aaPredicted RBP15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TEX10Q9NXF1 929 aaPredicted RBP15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ANAPC2Q9UJX6 822 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 FIS1Q9Y3D6 152 aa15.23■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MYOCOSA0A1B0GUC4 107 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 WDR91A4D1P6 747 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 BIRC5O15392 142 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 GUCY1B2O75343 617 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CHEK2O96017 543 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 DHRS4L1P0CG22 281 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 H2AFXP16104 143 aaPredicted RBP15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MAGOHP61326 146 aaKnown RBP15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 IGLV3-21P80748 117 aaPredicted RBP15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 FOLH1Q04609 750 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ACSM2AQ08AH3 577 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MPP2Q14168 576 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 KANK2Q63ZY3 851 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 B3GNTL1Q67FW5 361 aaPredicted RBP15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ACSM2BQ68CK6 577 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 OR52E8Q6IFG1 317 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 LINC00696Q6ZRV3 163 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TRIM46Q7Z4K8 759 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 HOMEZQ8IX15 550 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 OR4N5Q8IXE1 308 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ZADH2Q8N4Q0 377 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 RBMXL3Q8N7X1 1067 aaKnown RBP15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 NFAM1Q8NET5 270 aaPredicted RBP15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 OR6Y1Q8NGX8 325 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ELP5Q8TE02 316 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TLCD1Q96CP7 247 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 APIPQ96GX9 242 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 LMF1Q96S06 567 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 VTI1BQ9UEU0 232 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 MCM8Q9UJA3 840 aa15.22■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 ATRXP46100 2492 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 GLOD5A6NK44 160 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SUV39H1O43463 412 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 PCDH7O60245 1069 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 RSL1D1O76021 490 aaKnown RBP15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SERPINE1P05121 402 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CD97P48960 835 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TAS2R50P59544 299 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 TRA2BP62995 288 aaKnown RBP15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 RAE1P78406 368 aaKnown RBP15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 BTKQ06187 659 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 BIKQ13323 160 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 CHI3L2Q15782 390 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 NADK2Q4G0N4 442 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 COLEC12Q5KU26 742 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SPDYAQ5MJ70 313 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 SH2D4BQ5SQS7 431 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 NDUFAF5Q5TEU4 345 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 H3F3CQ6NXT2 135 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 RNF165Q6ZSG1 346 aa15.21■□□□□ 0.03
MSH5-SAPCD1-206ENST00000491552 HDXQ7Z353 690 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms