RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 POC5Q8NA72 575 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PCSK9Q8NBP7 692 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PSD4Q8NDX1 1056 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF548Q8NEK5 533 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZMIZ2Q8NF64 920 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 KBTBD8Q8NFY9 601 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 OR6B3Q8NGW1 331 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 OR5K1Q8NHB7 308 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 OR14C36Q8NHC7 312 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PSMA8Q8TAA3 256 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ITFG1Q8TB96 612 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZFAND1Q8TCF1 268 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SNX33Q8WV41 574 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ING5Q8WYH8 240 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ST8SIA2Q92186 375 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC7A6Q92536 515 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HTRA1Q92743 480 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RPL3LQ92901 407 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PEX13Q92968 403 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TADA1Q96BN2 335 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SDCCAG3Q96C92 435 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TMCO6Q96DC7 493 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MYEOVQ96EZ4 313 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 AHCYL2Q96HN2 611 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SGCZQ96LD1 299 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SENP8Q96LD8 212 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF560Q96MR9 790 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 WDFY2Q96P53 400 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 OR2A14Q96R47 310 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SDHCQ99643 169 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 APOL4Q9BPW4 351 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TBL1YQ9BQ87 522 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MED10Q9BTT4 135 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MLST8Q9BVC4 326 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 GPR87Q9BY21 358 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ITPAQ9BY32 194 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 KRTAP1-5Q9BYS1 174 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 DCSTAMPQ9H295 470 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ADNPQ9H2P0 1102 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF768Q9H5H4 540 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TFB2MQ9H5Q4 396 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RETREG1Q9H6L5 497 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 CWH43Q9H720 699 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PLEKHA5Q9HAU0 1116 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 SYTL2Q9HCH5 934 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 WDR6Q9NNW5 1121 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZDHHC4Q9NPG8 344 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 POLE4Q9NR33 117 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ASAH2Q9NR71 780 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ABCB10Q9NRK6 738 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PLCXD1Q9NUJ7 323 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 HCFC1R1Q9NWW0 138 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 OSER1Q9NX31 292 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ASIC5Q9NY37 505 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 IL37Q9NZH6 218 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 FNIP2Q9P278 1114 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 UBA2Q9UBT2 640 aaPredicted RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 KCNN3Q9UGI6 736 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 RIMKLBQ9ULI2 386 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TBC1D24Q9ULP9 559 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 AAR2Q9Y312 384 aaKnown RBP3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 TPRKBQ9Y3C4 175 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PCDHGB6Q9Y5F9 930 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PCDHGB2Q9Y5G2 931 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 PEX16Q9Y5Y5 336 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 MYO9BQ13459 2157 aa3.31□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF106Q9H2Y7 1883 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 A0A0U1RQS6 177 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 A0A0X1KG70 313 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PNMA8CA0A1B0GUJ8 204 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ATP6AP2A0A1C7CYW4 349 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 A0A1W2PQ67 120 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PDZK1P1A8MUH7 402 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 FAM220BPB1ANY3 271 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 H0Y626 953 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 H3BMM5 538 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TRIM77I1YAP6 450 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 LEFTY2O00292 366 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CTDSP2O14595 271 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 BET1O15155 118 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 GRM6O15303 877 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SSX4O60224 188 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 KERAO60938 352 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF780AO75290 641 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 WBP4O75554 376 aaKnown RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ATP6AP2O75787 350 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 TRIM16O95361 564 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 APOA1P02647 267 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 MT-ND1P03886 318 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 SEMG1P04279 462 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CA3P07451 260 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 YES1P07947 543 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 PCNAP12004 261 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 IL7P13232 177 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 NCF1P14598 390 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CD1DP15813 335 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 NCK1P16333 377 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 CD36P16671 472 aa3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 HOXB9P17482 250 aaPredicted RBP3.3□□□□□ -1.88
CRNKL1-203ENST00000490258 ERCC2P18074 760 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms