RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CDH16O75309 829 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 PRKRAO75569 313 aaKnown RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 OR4F21O95013 312 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 TAC1P20366 129 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 CD96P40200 585 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 MLF1P58340 268 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 TNFRSF17Q02223 184 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 MRPL49Q13405 166 aaKnown RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 ELAVL1Q15717 326 aaKnown RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 MEP1AQ16819 746 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 TCHHL1Q5QJ38 904 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 ZYG11AQ6WRX3 759 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 GPR180Q86V85 440 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 ATCAYQ86WG3 371 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 RPS19BP1Q86WX3 136 aaKnown RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 MDS2Q8NDY4 140 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 GRHL3Q8TE85 626 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 UCN3Q969E3 161 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 CAVIN3Q969G5 261 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 MAGEB10Q96LZ2 347 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 SIGLEC12Q96PQ1 595 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 SERPINI1Q99574 410 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 ALOXE3Q9BYJ1 711 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 TRIM45Q9H8W5 580 aaPredicted RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 PNO1Q9NRX1 252 aaKnown RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 TRPS1Q9UHF7 1281 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 TEKT2Q9UIF3 430 aa13.25□□□□□ -0.29
COL9A2-208ENST00000488463 DIDO1Q9BTC0 2240 aaKnown RBP13.25□□□□□ -0.29
COL9A2-208ENST00000488463 BLACEA4D250 179 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 SMIM23A6NLE4 172 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 UBFD1O14562 309 aaKnown RBP13.24□□□□□ -0.29
COL9A2-208ENST00000488463 GLRA3O75311 464 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 NEURL1O76050 574 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 SUPT7LO94864 414 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 DDAH2O95865 285 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 PDYNP01213 254 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 GBAP04062 536 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 CPN2P22792 545 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 TPP2P29144 1249 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-208ENST00000488463 TRHRP34981 398 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-208ENST00000488463 RAP1GDS1P52306 607 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 PHEXP78562 749 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 ID2Q02363 134 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 GALNT1Q10472 559 aaPredicted RBP13.24□□□□□ -0.29
COL9A2-208ENST00000488463 TBL3Q12788 808 aaKnown RBP13.24□□□□□ -0.29
COL9A2-208ENST00000488463 ERCC6LQ2NKX8 1250 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 EMBQ6PCB8 327 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 DGAT2L6Q6ZPD8 337 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 SLC22A9Q8IVM8 553 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 METTL4Q8N3J2 472 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 SLC5A8Q8N695 610 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 ZNF321PQ8N8H1 164 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 FAR1Q8WVX9 515 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 NCLNQ969V3 563 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 SLX1AQ9BQ83 275 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 MRPL1Q9BYD6 325 aaKnown RBP13.24□□□□□ -0.29
COL9A2-208ENST00000488463 CDCP1Q9H5V8 836 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 RPF2Q9H7B2 306 aaKnown RBP13.24□□□□□ -0.29
COL9A2-208ENST00000488463 MS4A12Q9NXJ0 267 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 LGALS13Q9UHV8 139 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 PCDHGB6Q9Y5F9 930 aa13.24□□□□□ -0.29
COL9A2-208ENST00000488463 SYNDIG1LA6NDD5 238 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 GABRR3A8MPY1 467 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 MANBAO00462 879 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 CDK2AP1O14519 115 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 PRAMEF2O60811 474 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 VPS4BO75351 444 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 AIFM1O95831 613 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 FAM58BPP0C7Q3 252 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 KRT15P19012 456 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 KRT4P19013 534 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 TDGF1P3P51864 188 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 LCP2Q13094 533 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 IFT88Q13099 833 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 SERTAD2Q14140 314 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 NR6A1Q15406 480 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 CRYBG3Q68DQ2 2970 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 SPINK14Q6IE38 97 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 TRABD2AQ86V40 505 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 NUDT13Q86X67 352 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 OR4N5Q8IXE1 308 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 TMEM132CQ8N3T6 1108 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 MREGQ8N565 214 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 CDYL2Q8N8U2 506 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 TANKQ92844 425 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 VMP1Q96GC9 406 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 SCMH1Q96GD3 660 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 CENPKQ9BS16 269 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 HES7Q9BYE0 225 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL9A2-208ENST00000488463 ELOVL6Q9H5J4 265 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 BRF2Q9HAW0 419 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 LYARQ9NX58 379 aaKnown RBP13.23□□□□□ -0.29
COL9A2-208ENST00000488463 TEX10Q9NXF1 929 aaPredicted RBP13.23□□□□□ -0.29
COL9A2-208ENST00000488463 ANKRD10Q9NXR5 420 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 PHF11Q9UIL8 331 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 ADAM29Q9UKF5 820 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 VPS4AQ9UN37 437 aa13.23□□□□□ -0.29
COL9A2-208ENST00000488463 ITPR2Q14571 2701 aa13.22□□□□□ -0.29
COL9A2-208ENST00000488463 TRBV11-1A0A0K0K1C0 115 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms