RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TRIM64CA6NLI5 447 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CCT8L1PA6NM43 557 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM150CB9EJG8 249 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CCL24O00175 119 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC33A1O00400 549 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 TRAPPC3O43617 180 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 HSF2BPO75031 334 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF189O75820 626 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 NXPH2O95156 264 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 GAS8-AS1O95177 125 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP1B1P05026 303 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CCDC159P0C7I6 412 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CALB2P22676 271 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 SFTPDP35247 375 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP6V1E1P36543 226 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 LEPRP48357 1165 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 GMPSP49915 693 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ADARP55265 1226 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 PTENP60484 403 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 MYL5Q02045 173 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CBX3Q13185 183 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 SPCS2Q15005 226 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 MORF4L2Q15014 288 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 INAQ16352 499 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF74Q16587 644 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 FUT11Q495W5 492 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 GPR33Q49SQ1 333 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 LBHQ53QV2 105 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF789Q5FWF6 425 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 SPECC1LQ69YQ0 1117 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 OR52E8Q6IFG1 317 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 C16orf87Q6PH81 154 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 SLC25A47Q6Q0C1 308 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 FIP1L1Q6UN15 594 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 UNC45BQ8IWX7 931 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 TUSC5Q8IXB3 177 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 PEX5LQ8IYB4 626 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 DCLK2Q8N568 766 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 MLKLQ8NB16 471 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 OR6S1Q8NH40 331 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 NCOA7Q8NI08 942 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 FIBINQ8TAL6 211 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP8B4Q8TF62 1192 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 UBLCP1Q8WVY7 318 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 APOBEC4Q8WW27 367 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 IFT81Q8WYA0 676 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 KRT35Q92764 455 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 RIT1Q92963 219 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ST6GALNAC6Q969X2 333 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 BTBD9Q96Q07 612 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM237Q96Q45 408 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 NDNQ99608 321 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CDK19Q9BWU1 502 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 PUS3Q9BZE2 481 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 LSG1Q9H089 658 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 HSD3B7Q9H2F3 369 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CENPHQ9H3R5 247 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 RIMS4Q9H426 269 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM206Q9H813 350 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 MAN2C1Q9NTJ4 1040 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNHIT6Q9NWK9 470 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 RMND1Q9NWS8 449 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 NDUFA13Q9P0J0 144 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 EPS15L1Q9UBC2 864 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 PPP1R3CQ9UQK1 317 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 EXOGQ9Y2C4 368 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ANGPTL3Q9Y5C1 460 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ADGRB3O60242 1522 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 LRRC7Q96NW7 1537 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 CASZ1Q86V15 1759 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 MROH7Q68CQ1 1323 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 USP42Q9H9J4 1324 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 SETBP1Q9Y6X0 1596 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 ARHGEF10O15013 1369 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 TMEM94Q12767 1356 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 PNPLA6Q8IY17 1366 aa3.37□□□□□ -1.87
ECHDC1-217ENST00000488087 QRICH2Q9H0J4 1663 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 PLCH2O75038 1416 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 POGZQ7Z3K3 1410 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 TRBV5-5A0A0J9YX44 114 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SDR42E2A6NKP2 422 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 C17orf105B2RV13 164 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 C2CD4DB7Z1M9 353 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 KBTBD13C9JR72 458 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 F8VVB4 439 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 F8VWA3 439 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CYTH3O43739 400 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SELENOFO60613 162 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 KRT33AO76009 404 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 CLDN1O95832 211 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 MOCS2O96007 188 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF18P17022 549 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 RPL35AP18077 110 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 S100A1P23297 94 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 PSMA5P28066 241 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 HOXD10P28358 340 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 NPBWR1P48145 328 aa3.36□□□□□ -1.87
ECHDC1-217ENST00000488087 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms