RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TREX2Q9BQ50 279 aaPredicted RBP11.31□□□□□ -0.6
VPS16-208ENST00000487461 SORBS1Q9BX66 1292 aaKnown RBP11.31□□□□□ -0.6
VPS16-208ENST00000487461 UCK2Q9BZX2 261 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 ROGDIQ9GZN7 287 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 COQ3Q9NZJ6 369 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 ITGB1BP2Q9UKP3 347 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 ZNF407Q9C0G0 2248 aa11.31□□□□□ -0.6
VPS16-208ENST00000487461 CSMD2Q7Z408 3487 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 DCHS2Q6V1P9 2916 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 SAP18O00422 153 aaKnown RBP11.3□□□□□ -0.6
VPS16-208ENST00000487461 GLSO94925 669 aaPredicted RBP11.3□□□□□ -0.6
VPS16-208ENST00000487461 SCELO95171 688 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 SLC35E2BP0CK96 405 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 PCNAP12004 261 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
VPS16-208ENST00000487461 PLTPP55058 493 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 PCDH1Q08174 1060 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 C2orf54Q08AI8 447 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 SERTAD2Q14140 314 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 TRADDQ15628 312 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 AP5B1Q2VPB7 878 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 GXYLT1Q4G148 440 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 TMEM35AQ53FP2 167 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 PIGGQ5H8A4 983 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 MED27Q6P2C8 311 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 MEX3BQ6ZN04 569 aaKnown RBP11.3□□□□□ -0.6
VPS16-208ENST00000487461 RAPH1Q70E73 1250 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 CHSY3Q70JA7 882 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 CMC1Q7Z7K0 106 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 RNF175Q8N4F7 328 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 PPM1NQ8N819 430 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 OR7G3Q8NG95 312 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 OR8K3Q8NH51 312 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 LILRB4Q8NHJ6 448 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 ZNF721Q8TF20 911 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 UBE2E3Q969T4 207 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 NXNL1Q96CM4 212 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 C14orf79Q96F83 325 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 ATOH8Q96SQ7 321 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 OR51B5Q9H339 312 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 TP63Q9H3D4 680 aaPredicted RBP11.3□□□□□ -0.6
VPS16-208ENST00000487461 ZDHHC11Q9H8X9 412 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 NMRAL1Q9HBL8 299 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 NUDT4Q9NZJ9 180 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 RNF6Q9Y252 685 aa11.3□□□□□ -0.6
VPS16-208ENST00000487461 DNAJC13O75165 2243 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 SUPT3HB4E1H0 165 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 NPIPA2E9PIF3 369 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 NPIPA3F8WFD2 350 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 K7EPI3 171 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 UBXN8O00124 270 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 FGF17O60258 216 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 SUPT3HO75486 399 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 MTHFD2P13995 350 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 CPN2P22792 545 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 CRABP2P29373 138 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 MAGEA4P43358 317 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
VPS16-208ENST00000487461 TLE4Q04727 773 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 PMPCAQ10713 525 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 SLAMF1Q13291 335 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 DEPDC1Q5TB30 811 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 KHDRBS2Q5VWX1 349 aaKnown RBP11.29□□□□□ -0.6
VPS16-208ENST00000487461 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 PAOXQ6QHF9 649 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 DGAT2L6Q6ZPD8 337 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 RTL4Q6ZR62 310 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 RGS9BPQ6ZS82 235 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 SLC22A16Q86VW1 577 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 OR5L2Q8NGL0 311 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 OR5M9Q8NGP3 310 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 UBTD2Q8WUN7 234 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 ASB5Q8WWX0 329 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 RND1Q92730 232 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 PPWD1Q96BP3 646 aaKnown RBP11.29□□□□□ -0.6
VPS16-208ENST00000487461 CMTM7Q96FZ5 175 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 SENP5Q96HI0 755 aaPredicted RBP11.29□□□□□ -0.6
VPS16-208ENST00000487461 SGCZQ96LD1 299 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 FAM173AQ9BQD7 235 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 PRM3Q9NNZ6 103 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 PNPLA3Q9NST1 481 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 OPTCQ9UBM4 332 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 LIPGQ9Y5X9 500 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 SPACA6W5XKT8 324 aa11.29□□□□□ -0.6
VPS16-208ENST00000487461 F8P00451 2351 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 NKX2-6A6NCS4 301 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 WASHC1A8K0Z3 465 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 ACOT7O00154 380 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 HRKO00198 91 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 KERAO60938 352 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 TOXO94900 526 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 IGHG3P01860 377 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 LTA4HP09960 611 aaKnown RBP11.28□□□□□ -0.6
VPS16-208ENST00000487461 CAPN3P20807 821 aa11.28□□□□□ -0.6
VPS16-208ENST00000487461 CHRNB4P30926 498 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms