RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ADAM29Q9UKF5 820 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 NFU1Q9UMS0 254 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 SLC5A6Q9Y289 635 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 YARS2Q9Y2Z4 477 aaKnown RBP6.54□□□□□ -1.36
VPS50-218ENST00000485994 ANGPTL3Q9Y5C1 460 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 SPACA6W5XKT8 324 aa6.54□□□□□ -1.36
VPS50-218ENST00000485994 CENPEQ02224 2701 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 SERTM1A2A2V5 107 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 TMEM200CA6NKL6 621 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 GABRR3A8MPY1 467 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 TRIM49D1C9J1S8 452 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 POC1B-GALNT4F8VUJ3 575 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 TGFBR3LH3BV60 316 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 PLPP1O14494 284 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 FCHO1O14526 889 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 OR7A17O14581 309 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ZNF500O60304 480 aaPredicted RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 SMIM24O75264 130 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 SEMA7AO75326 666 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 NEURL1O76050 574 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ZFAND5O76080 213 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 SEMA3DO95025 777 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 AGFG2O95081 481 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 MLYCDO95822 493 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 GSTA1P08263 222 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 BMP2P12643 396 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 TNFRSF8P28908 595 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 PPP2R1BP30154 601 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 TLX1P31314 330 aaPredicted RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 BSGP35613 385 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 DEKP35659 375 aaKnown RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 CYB561P49447 251 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 HNRNPFP52597 415 aaKnown RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 NAA20P61599 178 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 PHEXP78562 749 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 SLAMF1Q13291 335 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 SLC29A2Q14542 456 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 UAP1Q16222 522 aaPredicted RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 C4orf17Q53FE4 359 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ADNP2Q6IQ32 1131 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 BNC2Q6ZN30 1099 aaPredicted RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 SH2D5Q6ZV89 423 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 GPR180Q86V85 440 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ZNF227Q86WZ6 799 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 TDRPQ86YL5 185 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 HOMEZQ8IX15 550 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 GPALPP1Q8IXQ4 340 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 BEST3Q8N1M1 668 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 POGLUT1Q8NBL1 392 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 TMEM52Q8NDY8 209 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 OR14A16Q8NHC5 309 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ANKRD9Q96BM1 317 aaPredicted RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 MRRFQ96E11 262 aaKnown RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 VMP1Q96GC9 406 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 SIGLEC12Q96PQ1 595 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 SERPINI1Q99574 410 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 MAPKAP1Q9BPZ7 522 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 CCDC77Q9BR77 488 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ZNF717Q9BY31 904 aaPredicted RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 NOL11Q9H8H0 719 aaKnown RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 ACTR8Q9H981 624 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 BRF2Q9HAW0 419 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ZBTB26Q9HCK0 441 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 DMRT3Q9NQL9 472 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 OLAHQ9NV23 265 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 LYARQ9NX58 379 aaKnown RBP6.53□□□□□ -1.36
VPS50-218ENST00000485994 LRFN1Q9P244 771 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 DCDC2Q9UHG0 476 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 PHF11Q9UIL8 331 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 PCTPQ9UKL6 214 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ZNF835Q9Y2P0 537 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 ASB4Q9Y574 426 aa6.53□□□□□ -1.36
VPS50-218ENST00000485994 FREM3P0C091 2139 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 A0A0A6YYD5 115 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 A0A0G2JN53 185 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 IQANK1A0A1B0GTG1 560 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 A0A1B0GUH1 482 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 EXOC1LA0A1B0GW35 172 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 LRRC14BA6NHZ5 514 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 NME2P1O60361 137 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 MYO1DO94832 1006 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 SIX3O95343 332 aaPredicted RBP6.52□□□□□ -1.37
VPS50-218ENST00000485994 GPR75O95800 540 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 UQCRHP07919 91 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 RPS17P08708 135 aaKnown RBP6.52□□□□□ -1.37
VPS50-218ENST00000485994 PCNAP12004 261 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 IMPDH1P20839 514 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 NME2P22392 152 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 CPN2P22792 545 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 CERS1P27544 350 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 TPP2P29144 1249 aaPredicted RBP6.52□□□□□ -1.37
VPS50-218ENST00000485994 EEF1DP29692 281 aaKnown RBP6.52□□□□□ -1.37
VPS50-218ENST00000485994 HSD17B3P37058 310 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 STT3AP46977 705 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 CCNG1P51959 295 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 STX4Q12846 297 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 TRAF3Q13114 568 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 SLC13A2Q13183 592 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 OR1C1Q15619 314 aa6.52□□□□□ -1.37
VPS50-218ENST00000485994 ZRSR2Q15696 482 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms