RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 CCDC22O60826 627 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 CTNSO60931 367 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 JRKO75564 520 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 PRKRAO75569 313 aaKnown RBP14.9□□□□□ -0.02
APOE-205ENST00000485628 CYC1P08574 325 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 ZGLP1P0C6A0 271 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 SPINK2P20155 84 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 AGXTP21549 392 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 CPN2P22792 545 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 RBMS1P29558 406 aaKnown RBP14.9□□□□□ -0.02
APOE-205ENST00000485628 STAT5AP42229 794 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 XCR1P46094 333 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 RHAGQ02094 409 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 C2orf80Q0P641 193 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 HEPACAMQ14CZ8 416 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 ZNF385BQ569K4 471 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 VWA2Q5GFL6 755 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 ARHGAP40Q5TG30 622 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 FAM199XQ6PEV8 388 aaPredicted RBP14.9□□□□□ -0.02
APOE-205ENST00000485628 PAOXQ6QHF9 649 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 QSOX2Q6ZRP7 698 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 MTDHQ86UE4 582 aaKnown RBP14.9□□□□□ -0.02
APOE-205ENST00000485628 TMEM132CQ8N3T6 1108 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 ESX1Q8N693 406 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 PLPP5Q8NEB5 264 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 OR8J2Q8NGG1 315 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 STT3BQ8TCJ2 826 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 TANKQ92844 425 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 NKD1Q969G9 470 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 TMEM121BQ9BXQ6 578 aaPredicted RBP14.9□□□□□ -0.02
APOE-205ENST00000485628 SLC7A5P2Q9GIP4 190 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 RPF2Q9H7B2 306 aaKnown RBP14.9□□□□□ -0.02
APOE-205ENST00000485628 TRPC4Q9UBN4 977 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 DKK4Q9UBT3 224 aa14.9□□□□□ -0.02
APOE-205ENST00000485628 FREM2Q5SZK8 3169 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 STMND1H3BQB6 276 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 FCHO1O14526 889 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 SLC22A3O75751 556 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 NR2F6P10588 404 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 NCF2P19878 526 aaPredicted RBP14.89□□□□□ -0.03
APOE-205ENST00000485628 BUD31P41223 144 aaPredicted RBP14.89□□□□□ -0.03
APOE-205ENST00000485628 WNT3P56703 355 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 HSD17B7P56937 341 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 PCBP4P57723 403 aaKnown RBP14.89□□□□□ -0.03
APOE-205ENST00000485628 ERV3-1Q14264 604 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 NCF4Q15080 339 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 BLOC1S3Q6QNY0 202 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 NLGN4XQ8N0W4 816 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 MIER2Q8N344 545 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 GLB1L3Q8NCI6 653 aaPredicted RBP14.89□□□□□ -0.03
APOE-205ENST00000485628 CCDC197Q8NCU1 140 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 NLGN4YQ8NFZ3 816 aaPredicted RBP14.89□□□□□ -0.03
APOE-205ENST00000485628 OR9I1Q8NGQ6 314 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 CLHC1Q8NHS4 586 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 TSPEARQ8WU66 669 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 NXPE2Q96DL1 559 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 FAIM2Q9BWQ8 316 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 DPY30Q9C005 99 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 THSD1Q9NS62 852 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 C14orf105Q9NVL8 296 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 G3BP2Q9UN86 482 aaKnown RBP14.89□□□□□ -0.03
APOE-205ENST00000485628 SSUH2Q9Y2M2 353 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 MMACHCQ9Y4U1 282 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 PCDHGA6Q9Y5G7 932 aa14.89□□□□□ -0.03
APOE-205ENST00000485628 FAM234BA2RU67 622 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 C21orf140B9A014 251 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 PSMD12O00232 456 aaPredicted RBP14.88□□□□□ -0.03
APOE-205ENST00000485628 RAD1O60671 282 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 TLX1P31314 330 aaPredicted RBP14.88□□□□□ -0.03
APOE-205ENST00000485628 SOX18P35713 384 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 CLNS1AP54105 237 aaKnown RBP14.88□□□□□ -0.03
APOE-205ENST00000485628 BTG2P78543 158 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 KLF10Q13118 480 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 RCAN2Q14206 197 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 DPY19L1Q2PZI1 675 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 TBC1D25Q3MII6 688 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 OR52E8Q6IFG1 317 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 R3HCC1LQ7Z5L2 792 aaKnown RBP14.88□□□□□ -0.03
APOE-205ENST00000485628 TREML1Q86YW5 311 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 CACNA2D3Q8IZS8 1091 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 EFCAB3Q8N7B9 438 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 FAM47BQ8NA70 645 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 OR7A2PQ8NGA2 310 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 CT55Q8WUE5 264 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 STARD8Q92502 1023 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 MR1Q95460 341 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 CNRIP1Q96F85 164 aaPredicted RBP14.88□□□□□ -0.03
APOE-205ENST00000485628 VN1R1Q9GZP7 353 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 PRM3Q9NNZ6 103 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 IFT80Q9P2H3 777 aaPredicted RBP14.88□□□□□ -0.03
APOE-205ENST00000485628 ERVK-11Q9UQG0 969 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 SPACA6W5XKT8 324 aa14.88□□□□□ -0.03
APOE-205ENST00000485628 A0A1W2PQ72 361 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 OR2W5A6NFC9 320 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 GLOD5A6NK44 160 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 MYO1GB0I1T2 1018 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 AKAP10O43572 662 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 FGF17O60258 216 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 LRATO95237 230 aa14.87□□□□□ -0.03
APOE-205ENST00000485628 GPR75O95800 540 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms