RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ACER2Q5QJU3 275 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 CUZD1Q86UP6 607 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 CATSPER1Q8NEC5 780 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 ZNF717Q9BY31 904 aaPredicted RBP17.9■□□□□ 0.46
SNX17-206ENST00000484886 CENPHQ9H3R5 247 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 DDX31Q9H8H2 851 aaKnown RBP17.9■□□□□ 0.46
SNX17-206ENST00000484886 WDR41Q9HAD4 459 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 BRF2Q9HAW0 419 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 ATG4BQ9Y4P1 393 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 CLCA3PQ9Y6N3 262 aa17.9■□□□□ 0.46
SNX17-206ENST00000484886 TMPRSS11DO60235 418 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 ULK1O75385 1050 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 PRKRAO75569 313 aaKnown RBP17.89■□□□□ 0.45
SNX17-206ENST00000484886 DNAJB13P59910 316 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 SERTAD2Q14140 314 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 TERF2Q15554 542 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 MEP1AQ16819 746 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 CCNYL2Q5T2Q4 361 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 LIPMQ5VYY2 423 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 C18orf63Q68DL7 685 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 ATCAYQ86WG3 371 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 CRLF3Q8IUI8 442 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 OR4N5Q8IXE1 308 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 BEST3Q8N1M1 668 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 TMEM132CQ8N3T6 1108 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 CISD2Q8N5K1 135 aaKnown RBP17.89■□□□□ 0.45
SNX17-206ENST00000484886 BANPQ8N9N5 519 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 B3GNT7Q8NFL0 401 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 OR1N1Q8NGS0 311 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 SUN3Q8TAQ9 357 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 FAM111AQ96PZ2 611 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 KCNA7Q96RP8 456 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 TMEM109Q9BVC6 243 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 DEFB126Q9BYW3 111 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 OXSMQ9NWU1 459 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 MKS1Q9NXB0 559 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 PLLPQ9Y342 182 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 TIMM22Q9Y584 194 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 CNTRLQ7Z7A1 2325 aa17.89■□□□□ 0.45
SNX17-206ENST00000484886 CPAMD8Q8IZJ3 1885 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 GCN1Q92616 2671 aaKnown RBP17.88■□□□□ 0.45
SNX17-206ENST00000484886 TRBV11-1A0A0K0K1C0 115 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 GLOD5A6NK44 160 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 RGS16O15492 202 aaPredicted RBP17.88■□□□□ 0.45
SNX17-206ENST00000484886 FGF17O60258 216 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 WISP1O95388 367 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 ESRRBO95718 433 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 COX7A2P14406 83 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 CLCN2P51788 898 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 FOXK1P85037 733 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 ZNF844Q08AG5 666 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 ASPHQ12797 758 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 ELAVL1Q15717 326 aaKnown RBP17.88■□□□□ 0.45
SNX17-206ENST00000484886 FRMD7Q6ZUT3 714 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 COMMD6Q7Z4G1 85 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 C10orf107Q8IVU9 208 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 NFAM1Q8NET5 270 aaPredicted RBP17.88■□□□□ 0.45
SNX17-206ENST00000484886 ELP5Q8TE02 316 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 AGAP11Q8TF27 550 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 TANKQ92844 425 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 DAZLQ92904 295 aaKnown RBP17.88■□□□□ 0.45
SNX17-206ENST00000484886 NCLNQ969V3 563 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 ZBTB9Q96C00 473 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 DGAT2Q96PD7 388 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 CDCP1Q9H5V8 836 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 ADAM29Q9UKF5 820 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 ASB4Q9Y574 426 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 PCDHGA10Q9Y5H3 936 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 CLDN16Q9Y5I7 305 aa17.88■□□□□ 0.45
SNX17-206ENST00000484886 TRAV17A0A0B4J275 112 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 A0A1W2PR48 441 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 OR5H15A6NDH6 313 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 C17orf105B2RV13 164 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 PROM1O43490 865 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 ERLIN1O75477 346 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 AIFM1O95831 613 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 HSD3B1P14060 373 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 HSD3B2P26439 372 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 ST13P50502 369 aaKnown RBP17.87■□□□□ 0.45
SNX17-206ENST00000484886 MAPK12P53778 367 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 KCNC4Q03721 635 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 FOLH1Q04609 750 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 CSTF3Q12996 717 aaKnown RBP17.87■□□□□ 0.45
SNX17-206ENST00000484886 PCLAFQ15004 111 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 MRM1Q6IN84 353 aaKnown RBP17.87■□□□□ 0.45
SNX17-206ENST00000484886 H3F3CQ6NXT2 135 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 RPS19BP1Q86WX3 136 aaKnown RBP17.87■□□□□ 0.45
SNX17-206ENST00000484886 METTL4Q8N3J2 472 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 OR14A16Q8NHC5 309 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 THAP3Q8WTV1 239 aaPredicted RBP17.87■□□□□ 0.45
SNX17-206ENST00000484886 HAS2Q92819 552 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 MIB2Q96AX9 1013 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 ANKRD9Q96BM1 317 aaPredicted RBP17.87■□□□□ 0.45
SNX17-206ENST00000484886 VMP1Q96GC9 406 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 SHCBP1LQ9BZQ2 653 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 OR8D2Q9GZM6 311 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 RNF32Q9H0A6 362 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 ANKRD10Q9NXR5 420 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 SLC17A7Q9P2U7 560 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 VPS29Q9UBQ0 182 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms