RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 LRRC74AQ0VAA2 488 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SQSTM1Q13501 440 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TRA2AQ13595 282 aaKnown RBP eCLIP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 LY6DQ14210 128 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TRIP10Q15642 601 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PGS1Q32NB8 556 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SOWAHCQ53LP3 525 aaPredicted RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SPANXN4Q5MJ08 99 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PRAMEF9Q5VWM5 478 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ICE2Q659A1 982 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 NANOGP8Q6NSW7 305 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TMIGD1Q6UXZ0 262 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 CCDC81Q6ZN84 652 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 IFNEQ86WN2 208 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 OOSP2Q86WS3 158 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 DTX1Q86Y01 620 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TMEM151BQ8IW70 566 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 LAS2Q8IYD9 372 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PQLC1Q8N2U9 271 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 AVL9Q8NBF6 648 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 GALNT6Q8NCL4 622 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 CLHC1Q8NHS4 586 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 LCN9Q8WX39 176 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 NKD1Q969G9 470 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 POP5Q969H6 163 aaKnown RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TMEM125Q96AQ2 219 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 FCRL1Q96LA6 429 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 GBP5Q96PP8 586 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TAAR9Q96RI9 348 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ZNF184Q99676 751 aaPredicted RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 EBPLQ9BY08 206 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 KLHL4Q9C0H6 718 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PCDHAC1Q9H158 963 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SRMSQ9H3Y6 488 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ACTL8Q9H568 366 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 NANOGQ9H9S0 305 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 UCK1Q9HA47 277 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 GEMIN8Q9NWZ8 242 aaKnown RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SOHLH2Q9NX45 425 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 AKAP7Q9P0M2 348 aaPredicted RBP6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ACTR3BQ9P1U1 418 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TAC3Q9UHF0 121 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 IL17BQ9UHF5 180 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 MAGEL2Q9UJ55 1249 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 TSC22D4Q9Y3Q8 395 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 LRRC42Q9Y546 428 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 AP4S1Q9Y587 144 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 PCDHB11Q9Y5F2 797 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 SNX13Q9Y5W8 968 aa6.59□□□□□ -1.36
BRCA1-216ENST00000484087 ARHGAP10A1A4S6 786 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ASPDHA6ND91 283 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 EVPLLA8MZ36 301 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 B4E171 279 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 STMND1H3BQB6 276 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 TMX2-CTNND1H3BSU7 103 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PYCARD-AS1I3L0S3 204 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 RFXANKO14593 260 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 POLR1CO15160 346 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 GSTA4O15217 222 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ZW10O43264 779 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PCDH7O60245 1069 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 LRATO95237 230 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 DLGAP3O95886 979 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 NTRK1P04629 796 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 GPIP06744 558 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ANXA4P09525 319 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ANKRD34CP0C6C1 535 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PRKAR1AP10644 381 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 UMPSP11172 480 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 FCGR1AP12314 374 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CDH1P12830 882 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 COX7A2P14406 83 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 UGT2B7P16662 529 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 NELFEP18615 380 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ATP6V1C1P21283 382 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CDH3P22223 829 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 HTR1EP28566 365 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 TIA1P31483 386 aaKnown RBP eCLIP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 TSPAN7P41732 249 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 GRIA3P42263 894 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 TRPC1P48995 793 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 GSK3BP49841 420 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 HNRNPFP52597 415 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 RPS18P62269 152 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 MC2RQ01718 297 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 RBBP5Q15291 538 aaKnown RBP6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ZIC1Q15915 447 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 GRAMD1BQ3KR37 738 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CMPK2Q5EBM0 449 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 MTX3Q5HYI7 312 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 COLEC12Q5KU26 742 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 MANEAQ5SRI9 462 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 CATSPEREQ5SY80 951 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 DCAF12Q5T6F0 453 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 ANXA8L1Q5VT79 327 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 IRAK1BP1Q5VVH5 260 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 LCN10Q6JVE6 187 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 LCN8Q6JVE9 175 aa6.58□□□□□ -1.36
BRCA1-216ENST00000484087 PWWP2BQ6NUJ5 590 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms