RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 LPCAT4Q643R3 524 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 UNQ9370/PRO34162Q6UXP9 181 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 ADAMTSL2Q86TH1 951 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 KDM1BQ8NB78 822 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 ZNF606Q8WXB4 792 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 MRPL45Q9BRJ2 306 aaKnown RBP8.64□□□□□ -1.03
TTC3-216ENST00000479930 EGLN1Q9GZT9 426 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 MFFQ9GZY8 342 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 TM7SF3Q9NS93 570 aa8.64□□□□□ -1.03
TTC3-216ENST00000479930 CLDN11O75508 207 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 WNT11O96014 354 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 TMEM225BP0DP42 221 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 MATN1P21941 496 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SSTR4P31391 388 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 RORAP35398 523 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 CCNFP41002 786 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 GABRA4P48169 554 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SNRPFP62306 86 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 GRB10Q13322 594 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 GBX1Q14549 363 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 CRB2Q5IJ48 1285 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 MRPL10Q7Z7H8 261 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 ZNF589Q86UQ0 364 aaPredicted RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 CLVS1Q8IUQ0 354 aaPredicted RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 DAZLQ92904 295 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 RFKQ969G6 155 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SECISBP2Q96T21 854 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 PAFAH2Q99487 392 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 ACO2Q99798 780 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 POLDIP3Q9BY77 421 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 DUSP16Q9BY84 665 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 GPR108Q9NPR9 543 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 CEP290O15078 2479 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 TLX2O43763 284 aaPredicted RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 PLAUP00749 431 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 BTNL3Q6UXE8 466 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 PCDHB18PQ96TA0 734 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SEMA4AQ9H3S1 761 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SIDT1Q9NXL6 827 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 MAGEL2Q9UJ55 1249 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 WNT9AO14904 365 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 CRTAPO75718 401 aaPredicted RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 CLPXO76031 633 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 FADS2O95864 444 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 FAM228BP0C875 321 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 C7P10643 843 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 GSK3BP49841 420 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 RHOBP62745 196 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SLC3A1Q07837 685 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 TARDBPQ13148 414 aaKnown RBP eCLIP8.63□□□□□ -1.036e-16■■■■■ 57
TTC3-216ENST00000479930 SLBPQ14493 270 aaKnown RBP eCLIP8.63□□□□□ -1.03
TTC3-216ENST00000479930 RNFT1Q5M7Z0 435 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 STEAP4Q687X5 459 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 SLC7A6Q92536 515 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 HBEGFQ99075 208 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 KATNBL1Q9H079 304 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SMG9Q9H0W8 520 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 MED28Q9H204 178 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 PRPF19Q9UMS4 504 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 ADAM23O75077 832 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 HTR1AP08908 422 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 RAB8AP61006 207 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 RAC1P63000 192 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 GPLD1P80108 840 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SYT16Q17RD7 645 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 TMEM31Q5JXX7 168 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SFRP5Q5T4F7 317 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 FAM122CQ6P4D5 195 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 DEFB107AQ8IZN7 70 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 FUKQ8N0W3 1084 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 OR2M7Q8NG81 312 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 M1APQ8TC57 530 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 NPRL2Q8WTW4 380 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 NMD3Q96D46 503 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 SFXN1Q9H9B4 322 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SAMD9Q5K651 1589 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 FANCGO15287 622 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 ZNF207O43670 478 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 PBX3P40426 434 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 GRIA1P42261 906 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 OR2A12Q8NGT7 310 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 ZNF417Q8TAU3 575 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 NECTIN4Q96NY8 510 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 ZNF587Q96SQ5 575 aaPredicted RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 WDR6Q9NNW5 1121 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 CCDC59Q9P031 241 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 APBB3O95704 486 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 MAGP20916 626 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 PPIBP23284 216 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 ECT2LQ008S8 904 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 DEFB121Q5J5C9 76 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 CELF3Q5SZQ8 465 aaKnown RBP8.63□□□□□ -1.03
TTC3-216ENST00000479930 OR5M10Q6IEU7 315 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 SH3RF1Q7Z6J0 888 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 GDPD5Q8WTR4 605 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 ATG4AQ8WYN0 398 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 RAD9AQ99638 391 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 TVP23BQ9NYZ1 205 aa8.63□□□□□ -1.03
TTC3-216ENST00000479930 PTCH2Q9Y6C5 1203 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms