RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PDHA2P29803 388 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CBSP35520 551 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 LIMS1P48059 325 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SNRPD2P62316 118 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 TEKQ02763 1124 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 NAE1Q13564 534 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SPHARQ15513 63 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SYCE2Q6PIF2 218 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 TMIGD1Q6UXZ0 262 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CPXM2Q8N436 756 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC6A18Q96N87 628 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 GIMAP4Q9NUV9 329 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CLN6Q9NWW5 311 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CNOT2Q9NZN8 540 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 YARS2Q9Y2Z4 477 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 PPIL1Q9Y3C6 166 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CMAHPQ9Y471 501 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SNX11Q9Y5W9 270 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 A0A1W2PQL4 384 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ZNF670-ZNF695F2Z2N8 137 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SMLR1H3BR10 107 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 AKR7A2O43488 359 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 PRMT3O60678 531 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ICMTO60725 284 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 MSL3P1P0C860 447 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 XCR1P46094 333 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 BDKRB1P46663 353 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 RPS5P46782 204 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 METAP1P53582 386 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CRISP1P54107 249 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 HTRA3P83110 453 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SCN1BQ07699 218 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SCARB2Q14108 478 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 DOC2AQ14183 400 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 FAM180BQ6P0A1 224 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 RDH10Q8IZV5 341 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 NLGN4YQ8NFZ3 816 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CIDECQ96AQ7 238 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC22A4Q9H015 551 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC25A19Q9HC21 320 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SPATA6Q9NWH7 488 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 RABL2AQ9UBK7 228 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 MAP4K5Q9Y4K4 846 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 HELZP42694 1942 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 FFAR1O14842 300 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 TSPAN6O43657 245 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 LEFTY1O75610 366 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 GADD45GO95257 159 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 POP4O95707 220 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 C8AP07357 584 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 PSMA1P25786 263 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 PBLDP30039 288 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 MC1RQ01726 317 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 HNRNPA0Q13151 305 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ASAH1Q13510 395 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 TEAD4Q15561 434 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 MPP7Q5T2T1 576 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SAXO2Q658L1 398 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC39A5Q6ZMH5 540 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 ADIPOR2Q86V24 386 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 KRT73Q86Y46 540 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CELF5Q8N6W0 485 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 YIPF7Q8N8F6 280 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 HHIPL1Q96JK4 782 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 RIPOR3Q96MK2 946 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 PKP4Q99569 1192 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 PIP5K1AQ99755 562 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 BTNL2Q9UIR0 455 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 SNX7Q9UNH6 387 aa12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 RUVBL1Q9Y265 456 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-208ENST00000479530 CHD9Q3L8U1 2897 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 TRBV4-1A0A0J9YWV2 114 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 SH3D21A4FU49 640 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC35F4A4IF30 521 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 CRYZL1O95825 349 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 C6orf47O95873 294 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 C8GP07360 202 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 CTSLP07711 333 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 CTSAP10619 480 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 GPC1P35052 558 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 OPRD1P41143 372 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 CAV3P56539 151 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 DUSP7Q16829 419 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 UAP1L1Q3KQV9 507 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 FLYWCH1Q4VC44 716 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 SLC35F1Q5T1Q4 408 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 IER5LQ5T953 404 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 GDPD4Q6W3E5 623 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 PRR23CQ6ZRP0 262 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 THOC6Q86W42 341 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
PDZRN3-208ENST00000479530 VWA5B2Q8N398 1253 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms