RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 OR8D2Q9GZM6 311 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 ASB7Q9H672 318 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 LHX6Q9UPM6 363 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 USP6P35125 1406 aa5.25□□□□□ -1.57
USF3-202ENST00000478658 OR6C74A6NCV1 312 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 ZBTB22O15209 634 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 KLF4O43474 513 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 DCNP07585 359 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 RETP07949 1114 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 MTHFD2P13995 350 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 TMEM198Q66K66 360 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 CRTC3Q6UUV7 619 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 TMEM135Q86UB9 458 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 SLCO6A1Q86UG4 719 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 PARGQ86W56 976 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 MRPS30Q9NP92 439 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 SNTG1Q9NSN8 517 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 BET1LQ9NYM9 111 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 CFTRP13569 1480 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 MYOCOSA0A1B0GUC4 107 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 A6NIN4 97 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 OR6C75A6NL08 312 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 H0Y8G0 127 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 STSP08842 583 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 SELEP16581 610 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 UGT1A6P19224 532 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 CLCN2P51788 898 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 PLK1P53350 603 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 DCDC1P59894 354 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 PPP4CP60510 307 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 RPS15AP62244 130 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 POU6F2P78424 691 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 GCNT1Q02742 428 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 TMEM201Q5SNT2 666 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 TLDC1Q6P9B6 456 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 CATSPERGQ6ZRH7 1159 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 CATSPERDQ86XM0 798 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 FAM129CQ86XR2 697 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 XYLT1Q86Y38 959 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 COMMD1Q8N668 190 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 GMCL1P1Q8NEA9 526 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 RASGRP4Q8TDF6 673 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 MUCL1Q96DR8 90 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 ZNF583Q96ND8 569 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 OR4K3Q96R72 315 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 OCEL1Q9H607 264 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 ELP3Q9H9T3 547 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 UBTD1Q9HAC8 227 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 LUZP4Q9P127 313 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 MROH6A6NGR9 719 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 AQP12BA6NM10 295 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 SIGLEC16A6NMB1 481 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 FAM155AB1AL88 458 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 F8VP50 259 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 OR7A17O14581 309 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 LYZL6O75951 148 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 CDK1P06493 297 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 OR5AL1P0C617 328 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 ZNF286BP0CG31 522 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 PRKCAP17252 672 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 NFYAP23511 347 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 PRKCIP41743 596 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 AFF3P51826 1226 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 HMGCS2P54868 508 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 EN1Q05925 392 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 ZNF423Q2M1K9 1284 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 FAM214AQ32MH5 1076 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 SCGB2B2Q4G0G5 96 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 LBHQ53QV2 105 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 ZNF425Q6IV72 752 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 REEP3Q6NUK4 255 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 UNC5DQ6UXZ4 953 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 AQP12AQ8IXF9 295 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 SMG8Q8ND04 991 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 PIWIL2Q8TC59 973 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 C1orf54Q8WWF1 131 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 FOXRED1Q96CU9 486 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 ADAD1Q96M93 576 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 ADARB2Q9NS39 739 aaKnown RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 LYRM2Q9NU23 88 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 SERPINE2P07093 398 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 DEFA4P12838 97 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 FASLGP48023 281 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 HOXA1P49639 335 aaPredicted RBP5.24□□□□□ -1.57
USF3-202ENST00000478658 PRKXP51817 358 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 GALEQ14376 348 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 HMGB4Q8WW32 186 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 HSFY1Q96LI6 401 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 ZFP3Q96NJ6 502 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 HERPUD2Q9BSE4 406 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 MARCH2Q9P0N8 246 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 RNF150Q9ULK6 438 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 CEPT1Q9Y6K0 416 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 SAMD9LQ8IVG5 1584 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 DUOX1Q9NRD9 1551 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 P2RX6O15547 441 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 ADAM20O43506 726 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 DNPH1O43598 174 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 ADH1BP00325 375 aa5.24□□□□□ -1.57
USF3-202ENST00000478658 HLA-DPB1P04440 258 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms