RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 KRTCAP3Q53RY4 240 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 LETMD1Q6P1Q0 360 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 CLEC9AQ6UXN8 241 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 TMIGD1Q6UXZ0 262 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.63□□□□□ -0.23
USP11-207ENST00000478596 ABHD11Q8NFV4 315 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 TTLQ8NG68 377 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 METTL6Q8TCB7 284 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 PSMF1Q92530 271 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 ZNF75CPQ92670 426 aaPredicted RBP13.63□□□□□ -0.23
USP11-207ENST00000478596 MAGEB18Q96M61 343 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 DMRTA2Q96SC8 542 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 SPSB2Q99619 263 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 VKORC1Q9BQB6 163 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 SPRTNQ9H040 489 aaPredicted RBP13.63□□□□□ -0.23
USP11-207ENST00000478596 MRPS2Q9Y399 296 aaKnown RBP13.63□□□□□ -0.23
USP11-207ENST00000478596 RNF11Q9Y3C5 154 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 PCDHGA11Q9Y5H2 935 aa13.63□□□□□ -0.23
USP11-207ENST00000478596 NDUFS4O43181 175 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 SKAP2O75563 359 aaPredicted RBP13.62□□□□□ -0.23
USP11-207ENST00000478596 SNUPNO95149 360 aaKnown RBP13.62□□□□□ -0.23
USP11-207ENST00000478596 ESRRBO95718 433 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 ONECUT2O95948 504 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 HPP00738 406 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 INHBBP09529 407 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 BCL6P41182 706 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 TFF3Q07654 80 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 RGS1Q08116 209 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 TBCCQ15814 346 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 ZIC1Q15915 447 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 IMPG1Q17R60 797 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 CLEC6AQ6EIG7 209 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 ZNF425Q6IV72 752 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 TLDC1Q6P9B6 456 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 FAM47EQ6ZV65 393 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 RNF44Q7L0R7 432 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 OVCH1Q7RTY7 1134 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 CRLF3Q8IUI8 442 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 DDIASQ8IXT1 998 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 KIRREL3Q8IZU9 778 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 TTC29Q8NA56 475 aaPredicted RBP13.62□□□□□ -0.23
USP11-207ENST00000478596 ZNF740Q8NDX6 193 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 CKAP2Q8WWK9 683 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 GPR137Q96N19 417 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 KCNA7Q96RP8 456 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 CENPKQ9BS16 269 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 NTMT1Q9BV86 223 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 PITHD1Q9GZP4 211 aaPredicted RBP13.62□□□□□ -0.23
USP11-207ENST00000478596 CHRNA10Q9GZZ6 450 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 RNF32Q9H0A6 362 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■□□□□ 8.9
USP11-207ENST00000478596 SLC26A1Q9H2B4 701 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 SPNS1Q9H2V7 528 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 SLC24A3Q9HC58 644 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 THAP1Q9NVV9 213 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 COQ3Q9NZJ6 369 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 MARCOQ9UEW3 520 aaPredicted RBP13.62□□□□□ -0.23
USP11-207ENST00000478596 PLCL2Q9UPR0 1127 aa13.62□□□□□ -0.23
USP11-207ENST00000478596 CCDC88CQ9P219 2028 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 PPP6CO00743 305 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 ADAM10O14672 748 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 AZIN1O14977 448 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 ITM2AO43736 263 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 CTSVO60911 334 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 VIMP08670 466 aaKnown RBP13.61□□□□□ -0.23
USP11-207ENST00000478596 KITP10721 976 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 CD22P20273 847 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 MSX1P28360 303 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 ADSLP30566 484 aaPredicted RBP13.61□□□□□ -0.23
USP11-207ENST00000478596 SERPINB1P30740 379 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 GABRA4P48169 554 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 RAP1GDS1P52306 607 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 PDCD2Q16342 344 aaPredicted RBP13.61□□□□□ -0.23
USP11-207ENST00000478596 NKG7Q16617 165 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 GGTA1PQ4G0N0 100 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 ASPGQ86U10 573 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 KBTBD2Q8IY47 623 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 CSNK1A1LQ8N752 337 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 L3MBTL4Q8NA19 623 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 MFSD9Q8NBP5 474 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 CAMKVQ8NCB2 501 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 SELENOMQ8WWX9 145 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 MBD6Q96DN6 1003 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 WDR34Q96EX3 536 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 MTERF1Q99551 399 aaKnown RBP13.61□□□□□ -0.23
USP11-207ENST00000478596 FAM60AQ9NP50 221 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 DNAJB12Q9NXW2 375 aaKnown RBP13.61□□□□□ -0.23
USP11-207ENST00000478596 PTGFRNQ9P2B2 879 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
USP11-207ENST00000478596 FAM171A2A8MVW0 826 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 UBFD1O14562 309 aaKnown RBP13.6□□□□□ -0.23
USP11-207ENST00000478596 PROM1O43490 865 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 HCRTR1O43613 425 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 SH3BGRLO75368 114 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 HOXD4P09016 255 aaPredicted RBP13.6□□□□□ -0.23
USP11-207ENST00000478596 UROSP10746 265 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 ITGAXP20702 1163 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 DNASE1P24855 282 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 GSTM2P28161 218 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms