RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 SLC9B1Q4ZJI4 515 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 SPIN4Q56A73 249 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 GALNT18Q6P9A2 607 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 TMEM205Q6UW68 189 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 PAGE2Q7Z2X7 111 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 ANKRD37Q7Z713 158 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 MRGPREQ86SM8 312 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 SCUBE1Q8IWY4 988 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 CLHC1Q8NHS4 586 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 CDC26Q8NHZ8 85 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 FAM76AQ8TAV0 307 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 TUBGCP3Q96CW5 907 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 C7orf26Q96N11 449 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 EFHD1Q9BUP0 239 aa14.91□□□□□ -0.02
COPS3-207ENST00000477299 LYARQ9NX58 379 aaKnown RBP14.91□□□□□ -0.02
COPS3-207ENST00000477299 NXT1Q9UKK6 140 aaKnown RBP14.91□□□□□ -0.02
COPS3-207ENST00000477299 DSPP15924 2871 aaKnown RBP14.91□□□□□ -0.02
COPS3-207ENST00000477299 PKD1L2Q7Z442 2459 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 IGKV3D-11A0A0A0MRZ8 115 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 GNG14A0A1W2PPG7 69 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 CELA2AP08217 269 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 IL3P08700 152 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 CD63P08962 238 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 EPHA3P29320 983 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 PTGER1P34995 402 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 TMPRSS3P57727 454 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 SF3A3Q12874 501 aaKnown RBP eCLIP14.9□□□□□ -0.02
COPS3-207ENST00000477299 NSDHLQ15738 373 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 NDUFAF5Q5TEU4 345 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 CPZQ66K79 652 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 DGAT2L6Q6ZPD8 337 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 RGS9BPQ6ZS82 235 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 MED25Q71SY5 747 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 CRLF3Q8IUI8 442 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 ARFGAP2Q8N6H7 521 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 OR11G2Q8NGC1 345 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.9□□□□□ -0.02
COPS3-207ENST00000477299 PIWIL2Q8TC59 973 aaKnown RBP14.9□□□□□ -0.02
COPS3-207ENST00000477299 GFM2Q969S9 779 aaKnown RBP14.9□□□□□ -0.02
COPS3-207ENST00000477299 FCRL1Q96LA6 429 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 WDR77Q9BQA1 342 aaPredicted RBP14.9□□□□□ -0.02
COPS3-207ENST00000477299 PRORYQ9H606 182 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 RPF2Q9H7B2 306 aaKnown RBP14.9□□□□□ -0.02
COPS3-207ENST00000477299 MEAF6Q9HAF1 191 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 SEMA3GQ9NS98 782 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 P4HTMQ9NXG6 502 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 CES1P1Q9UKY3 287 aa14.9□□□□□ -0.02
COPS3-207ENST00000477299 ARGFXA6NJG6 315 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 HDAC3O15379 428 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 CTNSO60931 367 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 DNAJB5O75953 348 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 SNUPNO95149 360 aaKnown RBP14.89□□□□□ -0.03
COPS3-207ENST00000477299 LRATO95237 230 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 PRR35P0CG20 571 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 C8orf89P0DMQ9 161 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 COX6A1P12074 109 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 BCKDHAP12694 445 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 SDC1P18827 310 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 IL10P22301 178 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 MDH1P40925 334 aaKnown RBP14.89□□□□□ -0.03
COPS3-207ENST00000477299 DUSP2Q05923 314 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 C2orf80Q0P641 193 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 Q0VFX4 171 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 SLC13A2Q13183 592 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 PCOLCEQ15113 449 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 SFT2D3Q587I9 215 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 IL23RQ5VWK5 629 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 QSOX2Q6ZRP7 698 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 LARP4Q71RC2 724 aaKnown RBP eCLIP14.89□□□□□ -0.03
COPS3-207ENST00000477299 ZNF595Q8IYB9 648 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 DNAJB14Q8TBM8 379 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 PPWD1Q96BP3 646 aaKnown RBP14.89□□□□□ -0.03
COPS3-207ENST00000477299 TSSK3Q96PN8 268 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 OR52B2Q96RD2 323 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 EBF4Q9BQW3 602 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 ALOXE3Q9BYJ1 711 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 TRIM55Q9BYV6 548 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 PRDM9Q9NQV7 894 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 PHF11Q9UIL8 331 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 PCDHA9Q9Y5H5 950 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 USH1CQ9Y6N9 552 aa14.89□□□□□ -0.03
COPS3-207ENST00000477299 TCRBV16S1A1N1A0A5B0 115 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 AKAP10O43572 662 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 EDF1O60869 148 aaKnown RBP14.88□□□□□ -0.03
COPS3-207ENST00000477299 NR2F6P10588 404 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 JAK1P23458 1154 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 ALDH9A1P49189 494 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 DIO3P55073 304 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 HSD17B7P56937 341 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 FOLH1Q04609 750 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 FAM71E1Q6IPT2 247 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 ANKRD26P1Q6NSI1 321 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 CGB2Q6NT52 195 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 CPEB2Q7Z5Q1 589 aaKnown RBP14.88□□□□□ -0.03
COPS3-207ENST00000477299 RAB43Q86YS6 212 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 LIX1Q8N485 282 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 ZSCAN1Q8NBB4 408 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 PPP3R2Q96LZ3 170 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 FAM117AQ9C073 453 aa14.88□□□□□ -0.03
COPS3-207ENST00000477299 PNO1Q9NRX1 252 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms