RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CCDC86Q9H6F5 360 aaKnown RBP10.54□□□□□ -0.72
VAPB-204ENST00000475243 ASB6Q9NWX5 421 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 RNF6Q9Y252 685 aa10.54□□□□□ -0.72
VAPB-204ENST00000475243 IL3P08700 152 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 CELP19835 753 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 FBLP22087 321 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 NRROSQ86YC3 692 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 AVL9Q8NBF6 648 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 CNIH3Q8TBE1 160 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 OR2M4Q96R27 311 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 FNIP2Q9P278 1114 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ZFR2Q9UPR6 939 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 YARS2Q9Y2Z4 477 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 SSX5O60225 188 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 SOX30O94993 753 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 BCKDHAP12694 445 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 IST1P53990 364 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 SLC18A1P54219 525 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 PSMA6P60900 246 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 TBPL1P62380 186 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 RAET1LQ5VY80 246 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 TMEM236Q5W0B7 351 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 NINJ1Q92982 152 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 MRGPRX2Q96LB1 330 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 A0A1W2PQU0 124 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 DFNA5O60443 496 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 H2BFMP0C1H6 154 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 FPR1P21462 350 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 GNRHRP30968 328 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 GRIK2Q13002 908 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 LIPJQ5W064 366 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 XKR5Q6UX68 686 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ASPGQ86U10 573 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 RAD9AQ99638 391 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ZNF701Q9NV72 531 aaPredicted RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 HLA-DPB1P04440 258 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 MAP2K4P45985 399 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 GALK2Q01415 458 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 INCA1Q0VD86 236 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 TMPPEQ6ZT21 453 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 SIGLEC10Q96LC7 697 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 GJD2Q9UKL4 321 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 LRRC42Q9Y546 428 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 PCDHGA2Q9Y5H1 932 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 KCNJ13O60928 360 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ACVR1BP36896 505 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ZNF630Q2M218 657 aaPredicted RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 ZNF550Q7Z398 422 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 APCDD1Q8J025 514 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 SMG8Q8ND04 991 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 HSPA12BQ96MM6 686 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 NAV1Q8NEY1 1877 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 CIB4A0PJX0 185 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ADORA3P0DMS8 318 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 CD97P48960 835 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 CDKN2DP55273 166 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ABRAXAS2Q15018 415 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 C6orf136Q5SQH8 315 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 GTF2IRD2BQ6EKJ0 949 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 UBE2Q1Q7Z7E8 422 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 GTF2IRD2Q86UP8 949 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 WDR20Q8TBZ3 569 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 C12orf43Q96C57 262 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 SLC6A7Q99884 636 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 EHD1Q9H4M9 534 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ZBTB20Q9HC78 741 aaPredicted RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 FANCFQ9NPI8 374 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ENAMQ9NRM1 1142 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 TMEM5Q9Y2B1 443 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ZNF451Q9Y4E5 1061 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 NEURL4Q96JN8 1562 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 SLC26A5P58743 744 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 ELOAQ14241 798 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 EIF2S3LQ2VIR3 472 aaKnown RBP10.53□□□□□ -0.72
VAPB-204ENST00000475243 FAM214AQ32MH5 1076 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 IER5LQ5T953 404 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.53□□□□□ -0.72
VAPB-204ENST00000475243 FCAMRQ8WWV6 532 aa10.53□□□□□ -0.72
VAPB-204ENST00000475243 CD8B2A6NJW9 211 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 MATN2O00339 956 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 C1GALT1C1LP0DN25 315 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 CD8BP10966 210 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 CD72P21854 359 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 XKRXQ6PP77 449 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 ZDHHC14Q8IZN3 488 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 ZSCAN1Q8NBB4 408 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 ZNF431Q8TF32 576 aaPredicted RBP10.52□□□□□ -0.72
VAPB-204ENST00000475243 KCNN3Q9UGI6 736 aa10.52□□□□□ -0.72
VAPB-204ENST00000475243 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.72
VAPB-204ENST00000475243 ASCC3Q8N3C0 2202 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 RTCAO00442 366 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 VIPR2P41587 438 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 EIF5AP63241 154 aaKnown RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 SAMD12Q8N8I0 201 aa10.52□□□□□ -0.73
VAPB-204ENST00000475243 CPNE2Q96FN4 548 aaPredicted RBP10.52□□□□□ -0.73
VAPB-204ENST00000475243 PEX11GQ96HA9 241 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms