RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 PCDHB11Q9Y5F2 797 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 NPIPB8E9PQR5 432 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 HAT1O14929 419 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 C21orf33P30042 268 aaPredicted RBP11.87□□□□□ -0.51
RNF220-211ENST00000474956 RCVRNP35243 200 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 SRSF11Q05519 484 aaKnown RBP11.87□□□□□ -0.51
RNF220-211ENST00000474956 C2orf80Q0P641 193 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 RGNQ15493 299 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 DESI1Q6ICB0 168 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 OLIG3Q7RTU3 272 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 HMGN2P46Q86SG4 172 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 PARP16Q8N5Y8 322 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 FAM83FQ8NEG4 500 aaPredicted RBP11.87□□□□□ -0.51
RNF220-211ENST00000474956 TMIEQ8NEW7 156 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 ZNF486Q96H40 463 aaPredicted RBP11.87□□□□□ -0.51
RNF220-211ENST00000474956 F2RL3Q96RI0 385 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 EPYCQ99645 322 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 OSGEPL1Q9H4B0 414 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 SPASTQ9UBP0 616 aa11.87□□□□□ -0.51
RNF220-211ENST00000474956 H7BY64 318 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 J3KTA2 159 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 DSCR3O14972 297 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 PRKRAO75569 313 aaKnown RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 KAT7O95251 611 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 IL3P08700 152 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 GTF2E2P29084 291 aaKnown RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 CASP3P42574 277 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 DEFA1P59665 94 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 DEFA3P59666 94 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 UBE3AQ05086 875 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SHHQ15465 462 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 FBXO43Q4G163 708 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 TMEM31Q5JXX7 168 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 NXPE4Q6UWF7 544 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 PARM1Q6UWI2 310 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 METTL4Q8N3J2 472 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SYNPOQ8N3V7 929 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 OR2L2Q8NH16 312 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 TFGQ92734 400 aaPredicted RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 OTUB1Q96FW1 271 aaPredicted RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 PRAP1Q96NZ9 151 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 TPK1Q9H3S4 243 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SLAMF7Q9NQ25 335 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 KCNK6Q9Y257 313 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 DYRK1BQ9Y463 629 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 PEX16Q9Y5Y5 336 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 PNMA8CA0A1B0GUJ8 204 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CDK1P06493 297 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 ALOX12P18054 663 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CDK3Q00526 305 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 IFITM2Q01629 132 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 VEZF1Q14119 521 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 IQCCQ4KMZ1 466 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SLX4IPQ5VYV7 408 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CCBE1Q6UXH8 406 aaPredicted RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 CCDC103Q8IW40 242 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 ADGRF3Q8IZF5 1079 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.86□□□□□ -0.519e-10■■■■■ 34.5
RNF220-211ENST00000474956 C16orf78Q8WTQ4 265 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CAPSLQ8WWF8 208 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 RMI1Q9H9A7 625 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CCDC177Q9NQR7 707 aaPredicted RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 KLHL20Q9Y2M5 609 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 PCDHGB3Q9Y5G1 929 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CLCA1A8K7I4 914 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 M0R129 80 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SNX4O95219 450 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 ACP5P13686 325 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SPNP16150 400 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 TIE1P35590 1138 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CLCNKAP51800 687 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 AGBL4Q5VU57 503 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 THOC7Q6I9Y2 204 aaKnown RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 GPR153Q6NV75 609 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 RNF130Q86XS8 419 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 CPA6Q8N4T0 437 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 DNAJC22Q8N4W6 341 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 MYADMQ96S97 322 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 BRF2Q9HAW0 419 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 FAM120CQ9NX05 1096 aaKnown RBP11.86□□□□□ -0.51
RNF220-211ENST00000474956 MKLN1Q9UL63 735 aa11.86□□□□□ -0.51
RNF220-211ENST00000474956 SERTM1A2A2V5 107 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 OR52A4PA6NMU1 304 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 RGS13O14921 159 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 NARSO43776 548 aaKnown RBP11.85□□□□□ -0.51
RNF220-211ENST00000474956 NME6O75414 186 aaPredicted RBP11.85□□□□□ -0.51
RNF220-211ENST00000474956 APOA1P02647 267 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 TCEA1P23193 301 aaKnown RBP11.85□□□□□ -0.51
RNF220-211ENST00000474956 GGT2P36268 569 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 SLC5A12Q1EHB4 618 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 PRAMEF14Q5SWL7 426 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 PRAMEF13Q5VWM6 474 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 LINC01555Q8NAE3 123 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 ZNF675Q8TD23 568 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 SLC35A5Q9BS91 424 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 NEK6Q9HC98 313 aa11.85□□□□□ -0.51
RNF220-211ENST00000474956 SNX8Q9Y5X2 465 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms