RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PSG11Q9UQ72 335 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ADAM18Q9Y3Q7 739 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CEPT1Q9Y6K0 416 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 URGCP-MRPS24S4R325 110 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 UHRF1BP1Q6BDS2 1440 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 CEP152O94986 1710 aa3.33□□□□□ -1.88
UBR3-208ENST00000474426 ROBO2Q9HCK4 1378 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 YTHDC2Q9H6S0 1430 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 A0A1W2PQF6 199 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 UBA6A0AVT1 1052 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 NEMP2A6NFY4 417 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 A6NIZ1 184 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 MKRN2OSH3BPM6 223 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 K7EP13 123 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 GSTA4O15217 222 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ACTL6BO94805 426 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 HOXC6P09630 235 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 IFNGR1P15260 489 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 FMO3P31513 532 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 AVPR1AP37288 418 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 MMP13P45452 471 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 RPL14P50914 215 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 SLC5A3P53794 718 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 EPHB3P54753 998 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 OGDHQ02218 1023 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 PTCHD3Q3KNS1 767 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 PCID2Q5JVF3 399 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 SYT6Q5T7P8 510 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 TYW3Q6IPR3 259 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 BTNL3Q6UXE8 466 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ABI3BPQ7Z7G0 1075 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 LYG2Q86SG7 212 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 CLEC10AQ8IUN9 316 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 NRMQ8IXM6 262 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 CMTR1Q8N1G2 835 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 TMEM199Q8N511 208 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 VGLL2Q8N8G2 317 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 FADS6Q8N9I5 356 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 WDSUB1Q8N9V3 476 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 CAMKVQ8NCB2 501 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 OR8J3Q8NGG0 315 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 OR10T2Q8NGX3 314 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 LRRC46Q96FV0 321 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 SLC30A3Q99726 388 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 DGCR6LQ9BY27 220 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ALOXE3Q9BYJ1 711 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 PLEKHA2Q9HB19 425 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ZNF160Q9HCG1 818 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 OXSMQ9NWU1 459 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ARPP21Q9UBL0 812 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 UPB1Q9UBR1 384 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ERRFI1Q9UJM3 462 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 SLC27A6Q9Y2P4 619 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 MTO1Q9Y2Z2 717 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 FYCO1Q9BQS8 1478 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 NEURL4Q96JN8 1562 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 NCAPD2Q15021 1401 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 A0A1B0GTH6 734 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 EML1O00423 815 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 FOXN1O15353 648 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 PJA2O43164 708 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 CYP26A1O43174 497 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 GADD45BO75293 160 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 ZNF806P0C7X5 589 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ZNF25P17030 456 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 MYF6P23409 242 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ATP5A1P25705 553 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 COILP38432 576 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 RGRP47804 291 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 CDH8P55286 799 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 WNT7BP56706 349 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ZNF528Q3MIS6 628 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 PLEKHN1Q494U1 663 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 GPR33Q49SQ1 333 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 TSTD2Q5T7W7 516 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 SLC27A4Q6P1M0 643 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 SLC39A4Q6P5W5 647 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 EIF3MQ7L2H7 374 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 SLC46A3Q7Z3Q1 461 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 KMT5CQ86Y97 462 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 CCDC71Q8IV32 467 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 CCDC54Q8NEL0 328 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 OR51L1Q8NGJ5 315 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 OR13C5Q8NGS8 318 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 NSMAFQ92636 917 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 P2RX5Q93086 422 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 MCUR1Q96AQ8 359 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 LENG9Q96B70 501 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ASB9Q96DX5 294 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 SENP5Q96HI0 755 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 ZFP42Q96MM3 310 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 PCYT2Q99447 389 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ZNF184Q99676 751 aaPredicted RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 UTP23Q9BRU9 249 aaKnown RBP3.32□□□□□ -1.88
UBR3-208ENST00000474426 PCGF1Q9BSM1 259 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ANKRD19PQ9H560 264 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ACTR8Q9H981 624 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 ZFYVE1Q9HBF4 777 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 MIOSQ9NXC5 875 aa3.32□□□□□ -1.88
UBR3-208ENST00000474426 B3GNT2Q9NY97 397 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms