RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 PRRC2CQ9Y520 2896 aaKnown RBP14.08□□□□□ -0.16
CALD1-215ENST00000472096 RELNP78509 3460 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 A0A0A6YYD5 115 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 TRAV17A0A0B4J275 112 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 OR5H15A6NDH6 313 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 MAN1A2O60476 641 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 CTNSO60931 367 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 LDB3O75112 727 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 VPS4BO75351 444 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 EEDO75530 441 aaKnown RBP14.07□□□□□ -0.16
CALD1-215ENST00000472096 ZIC2O95409 532 aaPredicted RBP14.07□□□□□ -0.16
CALD1-215ENST00000472096 PROCP04070 461 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 UQCRFS1P47985 274 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 PRKAA2P54646 552 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 SLAMF1Q13291 335 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 FAM219BQ5XKK7 198 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 MRM1Q6IN84 353 aaKnown RBP14.07□□□□□ -0.16
CALD1-215ENST00000472096 NUDT13Q86X67 352 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 LGI4Q8N135 537 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 APCDD1LQ8NCL9 501 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 B3GNT7Q8NFL0 401 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 MYRIPQ8NFW9 859 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 TRPC4APQ8TEL6 797 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 CAVIN3Q969G5 261 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 MTFMTQ96DP5 389 aaKnown RBP14.07□□□□□ -0.16
CALD1-215ENST00000472096 L3HYPDHQ96EM0 354 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 ZNF382Q96SR6 550 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 ELOVL6Q9H5J4 265 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 DDX31Q9H8H2 851 aaKnown RBP14.07□□□□□ -0.16
CALD1-215ENST00000472096 LYARQ9NX58 379 aaKnown RBP14.07□□□□□ -0.16
CALD1-215ENST00000472096 MS4A12Q9NXJ0 267 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 STMN3Q9NZ72 180 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 ABI3Q9P2A4 366 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 VPS4AQ9UN37 437 aa14.07□□□□□ -0.16
CALD1-215ENST00000472096 PPIEQ9UNP9 301 aaKnown RBP14.07□□□□□ -0.16
CALD1-215ENST00000472096 HIVEP3Q5T1R4 2406 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 G3V2L1 256 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 SIAH2O43255 324 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 TMPRSS11DO60235 418 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 OR4F21O95013 312 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 MYL2P10916 166 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 IMPDH1P20839 514 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 GNLYP22749 145 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 IGLV3-21P80748 117 aaPredicted RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 STX4Q12846 297 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 ELAVL1Q15717 326 aaKnown RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 RPUSD3Q6P087 351 aaKnown RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 ZYG11AQ6WRX3 759 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 VASH1Q7L8A9 365 aaPredicted RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 GPR180Q86V85 440 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 C4orf33Q8N1A6 199 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 RIBC1Q8N443 379 aaPredicted RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 OR1N1Q8NGS0 311 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 ANKRD9Q96BM1 317 aaPredicted RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 VMP1Q96GC9 406 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 BARD1Q99728 777 aaKnown RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.16
CALD1-215ENST00000472096 FARSBQ9NSD9 589 aaKnown RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 ZNF223Q9UK11 482 aaPredicted RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 SNX6Q9UNH7 406 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 ATG4BQ9Y4P1 393 aa14.06□□□□□ -0.16
CALD1-215ENST00000472096 COPG1Q9Y678 874 aaKnown RBP14.06□□□□□ -0.16
CALD1-215ENST00000472096 CROCCQ5TZA2 2017 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 DOPEY2Q9Y3R5 2298 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 TRBV11-1A0A0K0K1C0 115 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 MYOCOSA0A1B0GUC4 107 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 GABRR3A8MPY1 467 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 TCP11X1B4DZS4 312 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 COPEO14579 308 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 FGF17O60258 216 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 PLIN3O60664 434 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 PRKRAO75569 313 aaKnown RBP14.05□□□□□ -0.16
CALD1-215ENST00000472096 PDYNP01213 254 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 IFNA16P05015 189 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 KRT4P19013 534 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 CRHR1P34998 444 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 BUD31P41223 144 aaPredicted RBP14.05□□□□□ -0.16
CALD1-215ENST00000472096 CCT5P48643 541 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 CLCN2P51788 898 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 GPR143P51810 404 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 ID2Q02363 134 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 LCP2Q13094 533 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 TUBA3CQ13748 450 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 SERTAD2Q14140 314 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 INAQ16352 499 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 ERCC6LQ2NKX8 1250 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 CCDC153Q494R4 210 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 SGO1Q5FBB7 561 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 C18orf63Q68DL7 685 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 TUBA3EQ6PEY2 450 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 CYP20A1Q6UW02 462 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 GPRIN3Q6ZVF9 776 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 RPS19BP1Q86WX3 136 aaKnown RBP14.05□□□□□ -0.16
CALD1-215ENST00000472096 TMEM132CQ8N3T6 1108 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 CDYL2Q8N8U2 506 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 OR14A16Q8NHC5 309 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 SELENOMQ8WWX9 145 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 NCLNQ969V3 563 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 CCDC126Q96EE4 140 aa14.05□□□□□ -0.16
CALD1-215ENST00000472096 ALOXE3Q9BYJ1 711 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms