RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 FERMT1Q9BQL6 677 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 TRAF4Q9BUZ4 470 aaPredicted RBP10.56□□□□□ -0.72
VPS26A-204ENST00000467852 RHBGQ9H310 441 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 CLK4Q9HAZ1 481 aaKnown RBP10.56□□□□□ -0.72
VPS26A-204ENST00000467852 PROK2Q9HC23 129 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 DNAJC11Q9NVH1 559 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 FEZ2Q9UHY8 353 aaPredicted RBP10.56□□□□□ -0.72
VPS26A-204ENST00000467852 TRHDEQ9UKU6 1024 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 AAR2Q9Y312 384 aaKnown RBP10.56□□□□□ -0.72
VPS26A-204ENST00000467852 ZDHHC9Q9Y397 364 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 RNF115Q9Y4L5 304 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 MMACHCQ9Y4U1 282 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 CLCA3PQ9Y6N3 262 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 BIRC6Q9NR09 4857 aa10.56□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF487B1APH4 448 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 CLOCKO15516 846 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 NR2C2P49116 596 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 TAS2R40P59535 323 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 DYNLT1P63172 113 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 RNF4P78317 190 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF791Q3KP31 576 aaPredicted RBP10.55□□□□□ -0.72
VPS26A-204ENST00000467852 BBS9Q3SYG4 887 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 EIPR1Q53HC9 387 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 OR2A2Q6IF42 318 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 P4HA3Q7Z4N8 544 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 PEG10Q86TG7 708 aaKnown RBP10.55□□□□□ -0.72
VPS26A-204ENST00000467852 GPSM1Q86YR5 675 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 RFX6Q8HWS3 928 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 PPFIBP2Q8ND30 876 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF740Q8NDX6 193 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 FAM13CQ8NE31 585 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 NUP43Q8NFH3 380 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 OR8K3Q8NH51 312 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 RAB3IL1Q8TBN0 382 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF418Q8TF45 676 aaPredicted RBP10.55□□□□□ -0.72
VPS26A-204ENST00000467852 DAZLQ92904 295 aaKnown RBP10.55□□□□□ -0.72
VPS26A-204ENST00000467852 CDK15Q96Q40 435 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 GRIP2Q9C0E4 1043 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 FAIMQ9NVQ4 179 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 CLCF1Q9UBD9 225 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 B3GALT5Q9Y2C3 310 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 IKBKGQ9Y6K9 419 aa10.55□□□□□ -0.72
VPS26A-204ENST00000467852 OR51F1A6NGY5 319 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 C3orf70A6NLC5 250 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 TRIM3O75382 744 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 CD8AP01732 235 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 CD3EP07766 207 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 APEHP13798 732 aaKnown RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 FOXN2P32314 431 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 GRK3P35626 688 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 GMPRP36959 345 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 PPARGP37231 505 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 NAGLUP54802 743 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 ASPHQ12797 758 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 MPEG1Q2M385 716 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 PGGHGQ32M88 737 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 PIGGQ5H8A4 983 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 TBCELQ5QJ74 424 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 ERICH6BQ5W0A0 696 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 ENPP6Q6UWR7 440 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 DNAJC14Q6Y2X3 702 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 KIAA1328Q86T90 577 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 DND1Q8IYX4 353 aaKnown RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF525Q8N782 197 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 TC2NQ8N9U0 490 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 MORN4Q8NDC4 146 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 C10orf105Q8TEF2 133 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 MRPL24Q96A35 216 aaKnown RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 TP53INP1Q96A56 240 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 LRRC45Q96CN5 670 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 SPACA9Q96E40 222 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF845Q96IR2 970 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 PANX3Q96QZ0 392 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 PKP2Q99959 881 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 ISCUQ9H1K1 167 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 HAUS4Q9H6D7 363 aa10.54□□□□□ -0.72
VPS26A-204ENST00000467852 EIF2B3Q9NR50 452 aaKnown RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
VPS26A-204ENST00000467852 E7ENX8 843 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 MYO1CO00159 1063 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 B3GALT4O96024 378 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 IFNA16P05015 189 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 CSF3P09919 207 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 PPP2R1BP30154 601 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 COILP38432 576 aaPredicted RBP10.53□□□□□ -0.72
VPS26A-204ENST00000467852 SCGB2A2Q13296 93 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 GGTLC2Q14390 218 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 PRPSAP1Q14558 356 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 RAB35Q15286 201 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 ELAVL1Q15717 326 aaKnown RBP10.53□□□□□ -0.72
VPS26A-204ENST00000467852 OCLNQ16625 522 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF672Q499Z4 452 aaPredicted RBP10.53□□□□□ -0.72
VPS26A-204ENST00000467852 ITPRIPL1Q6GPH6 555 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 ZNF571Q7Z3V5 609 aaPredicted RBP10.53□□□□□ -0.72
VPS26A-204ENST00000467852 VSIG1Q86XK7 387 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 NEUROG1Q92886 237 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 TBL1YQ9BQ87 522 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
VPS26A-204ENST00000467852 GBA3Q9H227 469 aa10.53□□□□□ -0.72
VPS26A-204ENST00000467852 UBQLN3Q9H347 655 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms