RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZNF785A8K8V0 405 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 F5H0A9 414 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 BTN3A3O00478 584 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 NDC80O14777 642 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 ARHGEF9O43307 516 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 HAUS5O94927 633 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 LY6G6DO95868 133 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 MT-CYBP00156 380 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TPM3P06753 285 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 COX6A1P12074 109 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 GZMAP12544 262 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 SLC6A2P23975 617 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 CXCR2P25025 360 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 PSMA2P25787 234 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 EEF1DP29692 281 aaKnown RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 MIPP30301 263 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 SHMT2P34897 504 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 RPS19P39019 145 aaKnown RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 SLC12A2P55011 1212 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 OGDHQ02218 1023 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 UBXN1Q04323 297 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 OCA2Q04671 838 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 GALNT2Q10471 571 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 RPA4Q13156 261 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 SLC13A2Q13183 592 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 CTBP1Q13363 440 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 OLIG2Q13516 323 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 PMS2P11Q13670 270 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 GRM7Q14831 915 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 ANKDD1AQ495B1 522 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 CCDC38Q502W7 563 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TXNRD3NBQ6F5E7 133 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 SLC30A6Q6NXT4 461 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 PRMT9Q6P2P2 845 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TMEM220Q6QAJ8 160 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 Q71RC1 249 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 COX15Q7KZN9 410 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TMTC1Q8IUR5 882 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 SIAH3Q8IW03 269 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 ZNF619Q8N2I2 560 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 DNAJC22Q8N4W6 341 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 SIRT6Q8N6T7 355 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 ZNF540Q8NDQ6 660 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 WFDC11Q8NEX6 87 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 HM13Q8TCT9 377 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TFAP2CQ92754 450 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 NMD3Q96D46 503 aaKnown RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 CSPG4P5Q96PW8 444 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TRIB3Q96RU7 358 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 PEBP4Q96S96 227 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 CPPED1Q9BRF8 314 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TP63Q9H3D4 680 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 NELFAQ9H3P2 528 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 GRPEL1Q9HAV7 217 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 TCF7L2Q9NQB0 619 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 PAPOLBQ9NRJ5 636 aaKnown RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 RBM22Q9NW64 420 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 PARPBPQ9NWS1 579 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 AURKAIP1Q9NWT8 199 aaPredicted RBP5.11□□□□□ -1.59
PTCD3-207ENST00000467273 EURLQ9NYK6 297 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 AIPL1Q9NZN9 384 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 OR6C2Q9NZP2 312 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 RNF6Q9Y252 685 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 PLEKHA6Q9Y2H5 1048 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 ZNF711Q9Y462 761 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 L3MBTL1Q9Y468 752 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 AKAP6Q13023 2319 aa5.11□□□□□ -1.59
PTCD3-207ENST00000467273 IGLV3-12A0A075B6K2 115 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 LOC102723996A0A087X1L8 192 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 IGHV1-45A0A0A0MS14 117 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 A0A0J9YY10 115 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 LINC00854A0A1B0GVQ3 168 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 CDHR4A6H8M9 788 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 A6NLC8 198 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 TMEM233B4DJY2 109 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 NPIPA5E9PKD4 350 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 APOL1O14791 398 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 RASGRF2O14827 1237 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 PRPF4O43172 522 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTCD3-207ENST00000467273 MTRF1O75570 445 aaKnown RBP5.1□□□□□ -1.59
PTCD3-207ENST00000467273 SUN1O94901 812 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 TGDSO95455 350 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 MMP2P08253 660 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 CYC1P08574 325 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 DHRS4L1P0CG22 281 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 PVRP15151 417 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 MSH3P20585 1137 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 UGT1A1P22309 533 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 HNF4AP41235 474 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 FOXL2P58012 376 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 PMP22Q01453 160 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 COL10A1Q03692 680 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 KLC1Q07866 573 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 NIPAL4Q0D2K0 466 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 MAMLD1Q13495 774 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 PKP1Q13835 747 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 BLMHQ13867 455 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 KEAP1Q14145 624 aa5.1□□□□□ -1.59
PTCD3-207ENST00000467273 HABP2Q14520 560 aaPredicted RBP5.1□□□□□ -1.59
PTCD3-207ENST00000467273 PAFAH1B3Q15102 231 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms