RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 MTF1Q14872 753 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 EXT1Q16394 746 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 TCP11X2Q5H9J9 407 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 SNRNP48Q6IEG0 339 aaKnown RBP2.81□□□□□ -1.96
XRN1-206ENST00000467077 KRT80Q6KB66 452 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 LEKR1Q6ZMV7 388 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 TMCO2Q7Z6W1 182 aaPredicted RBP2.81□□□□□ -1.96
XRN1-206ENST00000467077 ADCK1Q86TW2 530 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 NUP37Q8NFH4 326 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 OR6J1Q8NGC5 347 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 OR4K1Q8NGD4 311 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 OR10Q1Q8NGQ4 319 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 PHOSPHO2Q8TCD6 241 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 MOB3AQ96BX8 217 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 RMDN1Q96DB5 314 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 SPAG5Q96R06 1193 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 LPAR4Q99677 370 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 CCDC3Q9BQI4 270 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 ZMYND12Q9H0C1 365 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 NOL11Q9H8H0 719 aaKnown RBP2.81□□□□□ -1.96
XRN1-206ENST00000467077 CNOT10Q9H9A5 744 aaKnown RBP2.81□□□□□ -1.96
XRN1-206ENST00000467077 RNF150Q9ULK6 438 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 CCL27Q9Y4X3 112 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 CSNK1G3Q9Y6M4 447 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 GRIN2DO15399 1336 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 KIAA1671Q9BY89 1806 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 TET1Q8NFU7 2136 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 TTC28Q96AY4 2481 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 ZFHX4Q86UP3 3567 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 MUC6Q6W4X9 2439 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 PLXNA4Q9HCM2 1894 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 EDDM13A0A1B0GTR0 161 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 SNURFLB1AK76 121 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 M0R296 226 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 WDR46O15213 610 aaKnown RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 CTAGE5O15320 804 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 TEX28O15482 410 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 DIAPH2O60879 1101 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 IDH1O75874 414 aaKnown RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 SLCO2B1O94956 709 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 SUPT20HL2P0C7V6 817 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 RFC2P35250 354 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 COPB2P35606 906 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 LHX1P48742 406 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 VAMP7P51809 220 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 RAD23AP54725 363 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 CSE1LP55060 971 aaKnown RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 XGP55808 180 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 CUL3Q13618 768 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 VEZF1Q14119 521 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 LY6DQ14210 128 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 CCDC158Q5M9N0 1113 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 VITQ6UXI7 678 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 RBPMS2Q6ZRY4 209 aaKnown RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 TMEM179Q6ZVK1 233 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 ARMCX2Q7L311 632 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 TLK2Q86UE8 772 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 IQCHQ86VS3 1027 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 NDUFAF2Q8N183 169 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 XXYLT1Q8NBI6 393 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 AQP11Q8NBQ7 271 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 SLC37A3Q8NCC5 494 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 Q8NFD4 153 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 VPS33AQ96AX1 596 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 FAM71F1Q96KD3 344 aaPredicted RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 TGS1Q96RS0 853 aaKnown RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 AP1M1Q9BXS5 423 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 TEX13BQ9BXU2 312 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 ALDH8A1Q9H2A2 487 aaPredicted RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 ST6GALNAC4Q9H4F1 302 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 VCPKMTQ9H867 229 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 PIH1D3Q9NQM4 214 aaKnown RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 CTNNA3Q9UI47 895 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 ZNF107Q9UII5 783 aaPredicted RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 CPSF3Q9UKF6 684 aaKnown RBP2.8□□□□□ -1.96
XRN1-206ENST00000467077 R4GN57 208 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 DNAH14Q0VDD8 3507 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 MYH6P13533 1939 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 LOXHD1Q8IVV2 1947 aa2.8□□□□□ -1.96
XRN1-206ENST00000467077 WDR87Q6ZQQ6 2873 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 ASTN1O14525 1302 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 A0A087WUV0 522 aaPredicted RBP2.79□□□□□ -1.96
XRN1-206ENST00000467077 TRBV5-5A0A0J9YX44 114 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 TSPY2A6NKD2 308 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 KRT33AO76009 404 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 GJB5O95377 273 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 IQCF3P0C7M6 154 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 TSPY3P0CV98 308 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 TSPY8P0CW00 308 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 PRKAR1AP10644 381 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 EEF2P13639 858 aaKnown RBP2.79□□□□□ -1.96
XRN1-206ENST00000467077 RPL35AP18077 110 aaKnown RBP2.79□□□□□ -1.96
XRN1-206ENST00000467077 KLK2P20151 261 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CD22P20273 847 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 CD27P26842 260 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 DNA2P51530 1060 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 DEFB103AP81534 67 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 MYL7Q01449 175 aa2.79□□□□□ -1.96
XRN1-206ENST00000467077 TSPY1Q01534 308 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms