RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SNX5Q9Y5X3 404 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 POMT1Q9Y6A1 747 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 ARID1AO14497 2285 aa1.9□□□□□ -2.11
GTF3C3-209ENST00000466862 TRAV34A0A0B4J273 112 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 BICDL2A1A5D9 508 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 TRIM64A6NGJ6 449 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 TRIM64BA6NI03 449 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 KRTAP4-16G5E9R7 235 aaPredicted RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 WDR46O15213 610 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 LUC7L3O95232 432 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 BAG2O95816 211 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 PROS1P07225 676 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 DLATP10515 647 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 SSTR1P30872 391 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 SRD5A2P31213 254 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 CXCL6P80162 114 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 SCN1BQ07699 218 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 RBBP4Q09028 425 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 PPP2R5CQ13362 524 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 HYAL4Q2M3T9 481 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 CCDC92Q53HC0 331 aaPredicted RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 ODF2Q5BJF6 829 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF544Q6NX49 715 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 CAVIN1Q6NZI2 390 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 C11orf88Q6PI97 169 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 ERN2Q76MJ5 926 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 ABI3BPQ7Z7G0 1075 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 CREBRFQ8IUR6 639 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 TDHQ8IZJ6 230 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC43A2Q8N370 569 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 C8orf46Q8TAG6 207 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 GDAP1Q8TB36 358 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 SAP25Q8TEE9 199 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 GRK7Q8WTQ7 553 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 RAD54LQ92698 747 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC25A23Q9BV35 468 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 THUMPD3Q9BV44 507 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 GTPBP2Q9BX10 602 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 MRPL9Q9BYD2 267 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 FAM129AQ9BZQ8 928 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 DPEP2Q9H4A9 486 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 ST6GALNAC4Q9H4F1 302 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 DBNDD1Q9H9R9 158 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 RPF1Q9H9Y2 349 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 MYOZ2Q9NPC6 264 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 NOCTQ9UK39 431 aaKnown RBP1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 FBXO7Q9Y3I1 522 aa1.89□□□□□ -2.11
GTF3C3-209ENST00000466862 IGHV3-35A0A0C4DH35 117 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 TNFSF11O14788 317 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 FLRT2O43155 660 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 PENKP01210 267 aaPredicted RBP1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 CCDC159P0C7I6 412 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 SPP1P10451 314 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 SKILP12757 684 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 FOSL2P15408 326 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 PRKCIP41743 596 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 HMGCS2P54868 508 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 RIPK4P57078 832 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 ERVPABLB-1P60509 514 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 UBXN1Q04323 297 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 TNK1Q13470 666 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 GPR50Q13585 617 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 PTK6Q13882 451 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 SLMAPQ14BN4 828 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF674Q2M3X9 581 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC27A4Q6P1M0 643 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 PPP1R21Q6ZMI0 780 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 C17orf107Q6ZR85 190 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 TBC1D10CQ8IV04 446 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 CCAR2Q8N163 923 aaKnown RBP1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 TMCO5AQ8N6Q1 288 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 IQUBQ8NA54 791 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 CLEC1AQ8NC01 280 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 NCOA7Q8NI08 942 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 MGARPQ8TDB4 240 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 PCNPQ8WW12 178 aaKnown RBP1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 FRAT1Q92837 279 aaPredicted RBP1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 SLC35C1Q96A29 364 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 CCDC114Q96M63 670 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 ANKRD27Q96NW4 1050 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 TSSK2Q96PF2 358 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 FERMT1Q9BQL6 677 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 HES7Q9BYE0 225 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 COPS7BQ9H9Q2 264 aaPredicted RBP1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 LMAN1LQ9HAT1 526 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 PLSCR3Q9NRY6 295 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 ADAM22Q9P0K1 906 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 DNAJB9Q9UBS3 223 aa1.88□□□□□ -2.11
GTF3C3-209ENST00000466862 A0A0U1RQK1 487 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 ZNF320A2RRD8 509 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 EPOPA6NHQ4 379 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 SAP18O00422 153 aaKnown RBP1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 LRRTM2O43300 516 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 STX6O43752 255 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 FCGR3BO75015 233 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 GOSR1O95249 250 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 LYPD3O95274 346 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 OR9G9P0C7N8 305 aa1.87□□□□□ -2.11
GTF3C3-209ENST00000466862 GPX3P22352 226 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms