RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 YIPF2Q9BWQ6 316 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 RPF2Q9H7B2 306 aaKnown RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 NEUROD4Q9HD90 331 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SLC35C2Q9NQQ7 365 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 PRDM9Q9NQV7 894 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 ENAMQ9NRM1 1142 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 SIDT1Q9NXL6 827 aaKnown RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 ZNF282Q9UDV7 671 aaPredicted RBP11.46□□□□□ -0.57
VPS16-206ENST00000466415 PCDHGA7Q9Y5G6 932 aa11.46□□□□□ -0.57
VPS16-206ENST00000466415 ADAMTS20P59510 1910 aa11.46□□□□□ -0.58
VPS16-206ENST00000466415 BLACEA4D250 179 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 FXYD1O00168 92 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 DLL1O00548 723 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 SCRG1O75711 98 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 MED26O95402 600 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 STAMBPO95630 424 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 GSNP06396 782 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 HBQ1P09105 142 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 CSNK2A2P19784 350 aaPredicted RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 TGM1P22735 817 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 PPP2R1BP30154 601 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 CDKN2CP42773 168 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 NCBP2P52298 156 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS16-206ENST00000466415 HNRNPFP52597 415 aaKnown RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 CORO7P57737 925 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 SIM1P81133 766 aaPredicted RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 MAT1AQ00266 395 aaKnown RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 HSPB3Q12988 150 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 TRIP6Q15654 476 aaKnown RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 SPDYE7PQ495Y7 208 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 LRIF1Q5T3J3 769 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 ARHGAP40Q5TG30 622 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 C1orf189Q5VU69 101 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 C8orf82Q6P1X6 216 aaPredicted RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 DLEU7Q6UYE1 221 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 BPHLQ86WA6 291 aaPredicted RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 DEFB124Q8NES8 71 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 OR4K14Q8NGD5 310 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 OR8J3Q8NGG0 315 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 OR5P2Q8WZ92 322 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 COL26A1Q96A83 441 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 MIEF2Q96C03 454 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 CCDC124Q96CT7 223 aaKnown RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 CLIP3Q96DZ5 547 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 PEX11GQ96HA9 241 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 CLPTM1LQ96KA5 538 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 DEPDC7Q96QD5 511 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 CMKLR1Q99788 373 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 GPATCH1Q9BRR8 931 aaKnown RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 RBCK1Q9BYM8 510 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 PAIP1Q9H074 479 aaKnown RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 SERHLQ9NQF3 203 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 ACSS1Q9NUB1 689 aaPredicted RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 OCIAD1Q9NX40 245 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 TAS2R7Q9NYW3 318 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 KCMF1Q9P0J7 381 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 VAPAQ9P0L0 249 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 SLAMF8Q9P0V8 285 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 DHCR7Q9UBM7 475 aaKnown RBP11.45□□□□□ -0.58
VPS16-206ENST00000466415 AP3M1Q9Y2T2 418 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 MAU2Q9Y6X3 613 aa11.45□□□□□ -0.58
VPS16-206ENST00000466415 ARID1BQ8NFD5 2236 aaPredicted RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 EVPLLA8MZ36 301 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 PROB1E7EW31 1015 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 H3BMH7 237 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 POLR1CO15160 346 aaPredicted RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 PGRMC2O15173 223 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 HYAL3O43820 417 aaPredicted RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 SCN2BO60939 215 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 DNAJB6O75190 326 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 CDK4P11802 303 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 PPIBP23284 216 aaKnown RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 ME2P23368 584 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 SLC6A2P23975 617 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 CHI3L1P36222 383 aaPredicted RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 PDX1P52945 283 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 MTPNP58546 118 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 INSM1Q01101 510 aaPredicted RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 IL11RAQ14626 422 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 MPEG1Q2M385 716 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 GTDC1Q4AE62 458 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 PRAMEF17Q5VTA0 474 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 NANOGP8Q6NSW7 305 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 RHBDD2Q6NTF9 364 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 FAM180BQ6P0A1 224 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 ANGPTL8Q6UXH0 198 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 PIP4P1Q86T03 277 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 LRRC25Q8N386 305 aaPredicted RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 FBXW8Q8N3Y1 598 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 DTWD1Q8N5C7 304 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 TANKQ92844 425 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 UCN3Q969E3 161 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 TMEM125Q96AQ2 219 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 ANKRD27Q96NW4 1050 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 THUMPD3Q9BV44 507 aaKnown RBP11.44□□□□□ -0.58
VPS16-206ENST00000466415 NANOGQ9H9S0 305 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 ZNF304Q9HCX3 659 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 TAS2R9Q9NYW1 312 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 TMEM181Q9P2C4 612 aa11.44□□□□□ -0.58
VPS16-206ENST00000466415 PACSIN3Q9UKS6 424 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms