RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 P2RX6O15547 441 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 SEC24DO94855 1032 aaPredicted RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 SCELO95171 688 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 C9P02748 559 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 EIF2S1P05198 315 aaKnown RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 IL6P05231 212 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 ANXA4P09525 319 aaPredicted RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 DGKQP52824 942 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 SNAP47Q5SQN1 464 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 C12orf43Q96C57 262 aaKnown RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 FCRL1Q96LA6 429 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 NUDT22Q9BRQ3 303 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 PLGRKTQ9HBL7 147 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 STARD5Q9NSY2 213 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 FAM86C1Q9NVL1 165 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 ATXN7L1Q9ULK2 861 aaPredicted RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 AGRPO00253 132 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 CLEC3AO75596 197 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 THRBP10828 461 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 JUNBP17275 347 aaPredicted RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 PHEXP78562 749 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 NR0B2Q15466 257 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 HKDC1Q2TB90 917 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 C10orf62Q5T681 223 aaPredicted RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 FAM9CQ8IZT9 166 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 MMP21Q8N119 569 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 METTL4Q8N3J2 472 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 SVOPLQ8N434 492 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 OR2T12Q8NG77 320 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 AURKBQ96GD4 344 aaPredicted RBP17.66■□□□□ 0.42
CAPN3-209ENST00000466222 ZNF583Q96ND8 569 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 C17orf62Q9BQA9 187 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 NTN4Q9HB63 628 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 TMED5Q9Y3A6 229 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 KLK4Q9Y5K2 254 aa17.66■□□□□ 0.42
CAPN3-209ENST00000466222 GNG14A0A1W2PPG7 69 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 UPK1AO00322 258 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 GSTA4O15217 222 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 YKT6O15498 198 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 PCDH7O60245 1069 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 PCDHGA12O60330 932 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 SNAP29O95721 258 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 CPNE6O95741 557 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 AHRP35869 848 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 EPHA4P54764 986 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 EMP3P54852 163 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 MTPNP58546 118 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 RAB8AP61006 207 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 RPS15AP62244 130 aaKnown RBP17.65■□□□□ 0.42
CAPN3-209ENST00000466222 SELPLGQ14242 412 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 MYBPC3Q14896 1274 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 SPIN4Q56A73 249 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 RBM48Q5RL73 367 aaKnown RBP17.65■□□□□ 0.42
CAPN3-209ENST00000466222 TTC23Q5W5X9 447 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 ANKRD26P1Q6NSI1 321 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 SHISA5Q8N114 240 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 C19orf47Q8N9M1 422 aaKnown RBP17.65■□□□□ 0.42
CAPN3-209ENST00000466222 TEFMQ96QE5 360 aaKnown RBP17.65■□□□□ 0.42
CAPN3-209ENST00000466222 ZFYVE21Q9BQ24 234 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 DPY30Q9C005 99 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 DNAJB9Q9UBS3 223 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 USP22Q9UPT9 525 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 RUVBL1Q9Y265 456 aaKnown RBP17.65■□□□□ 0.42
CAPN3-209ENST00000466222 NEUROG3Q9Y4Z2 214 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 KMT2EQ8IZD2 1858 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 TMEM131Q92545 1883 aa17.65■□□□□ 0.42
CAPN3-209ENST00000466222 TRIM64BA6NI03 449 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 A8MU76 341 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 H0YGG7 62 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 NOL3O60936 208 aaKnown RBP17.64■□□□□ 0.42
CAPN3-209ENST00000466222 ALPLP05186 524 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 TPP2P29144 1249 aaPredicted RBP17.64■□□□□ 0.42
CAPN3-209ENST00000466222 TIA1P31483 386 aaKnown RBP eCLIP17.64■□□□□ 0.42
CAPN3-209ENST00000466222 BSGP35613 385 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 GPR3P46089 330 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 ARF3P61204 181 aaPredicted RBP17.64■□□□□ 0.42
CAPN3-209ENST00000466222 KCNAB1Q14722 419 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 NR1D2Q14995 579 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 MAPKAPK3Q16644 382 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 LAIR1Q6GTX8 287 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 ZNF773Q6PK81 442 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 ZNF793Q6ZN11 406 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 OFCC1Q8IZS5 231 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 FAM181AQ8N9Y4 354 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 GTF2H4Q92759 462 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 ATOH1Q92858 354 aaPredicted RBP17.64■□□□□ 0.42
CAPN3-209ENST00000466222 TMBIM1Q969X1 311 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 PPP1R14BQ96C90 147 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 MS4A6EQ96DS6 147 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 MAGIXQ9H6Y5 334 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 POLR1BQ9H9Y6 1135 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 USE1Q9NZ43 259 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 IFT80Q9P2H3 777 aaPredicted RBP17.64■□□□□ 0.42
CAPN3-209ENST00000466222 ADGRE2Q9UHX3 823 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 PPT2Q9UMR5 302 aa17.64■□□□□ 0.42
CAPN3-209ENST00000466222 CUL9Q8IWT3 2517 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 ERI3O43414 337 aaKnown RBP17.64■□□□□ 0.41
CAPN3-209ENST00000466222 IL1RNP18510 177 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 SEPHS1P49903 392 aa17.64■□□□□ 0.41
CAPN3-209ENST00000466222 PLIN5Q00G26 463 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms