RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 EFHD1Q9BUP0 239 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 SPATA16Q9BXB7 569 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 FRMD8Q9BZ67 464 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-204ENST00000463622 FAM129AQ9BZQ8 928 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 FAM83DQ9H4H8 585 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 TRABDQ9H4I3 376 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 ASB8Q9H765 288 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 SMURF2Q9HAU4 748 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 FGF22Q9HCT0 170 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 MLXIPLQ9NP71 852 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 PPANQ9NQ55 473 aaKnown RBP3.47□□□□□ -1.85
SCFD1-204ENST00000463622 HACD3Q9P035 362 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 AKAP7Q9P0M2 348 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-204ENST00000463622 VPS18Q9P253 973 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 ATXN10Q9UBB4 475 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 NFKBIL1Q9UBC1 381 aaPredicted RBP3.47□□□□□ -1.85
SCFD1-204ENST00000463622 SLC23A2Q9UGH3 650 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 RIMKLBQ9ULI2 386 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 RUVBL2Q9Y230 463 aaKnown RBP3.47□□□□□ -1.85
SCFD1-204ENST00000463622 TP53TG5Q9Y2B4 290 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 DGKBQ9Y6T7 804 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 MED13Q9UHV7 2174 aa3.47□□□□□ -1.85
SCFD1-204ENST00000463622 A0A087WUV0 522 aaPredicted RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 IGHV5-10-1A0A0J9YXX1 117 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 LOC101059948A0A1B0GTJ6 334 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 EXOC1LA0A1B0GW35 172 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 OR2AG2A6NM03 316 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 C2orf81A6NN90 581 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 TCP11X1B4DZS4 312 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 TRIM49D1C9J1S8 452 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 H3BMM5 538 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 PSMD11O00231 422 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 DYNC1I1O14576 645 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 RFPL1O75677 317 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 EML2O95834 649 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF8P17098 575 aaPredicted RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 NR1D1P20393 614 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 FMO4P31512 558 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 STX2P32856 288 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 LEPRP48357 1165 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 THOP1P52888 689 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 LIMK2P53671 638 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 CSE1LP55060 971 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 EIF3BP55884 814 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 SRP54P61011 504 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 POLR2LP62875 67 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 CDK3Q00526 305 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 CACNG1Q06432 222 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 ELP6Q0PNE2 266 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 EIF2S3LQ2VIR3 472 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 C14orf28Q4W4Y0 310 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 CEP85LQ5SZL2 805 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 PDPK2PQ6A1A2 396 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 ASB18Q6ZVZ8 466 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 TAS2R42Q7RTR8 314 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 TIPARPQ7Z3E1 657 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 SNX20Q7Z614 316 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 GKN2Q86XP6 184 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 C4orf33Q8N1A6 199 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 TRAM1L1Q8N609 369 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 OTUD6BQ8N6M0 293 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 BMPERQ8N8U9 685 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 SIDT2Q8NBJ9 832 aaKnown RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 DDHD1Q8NEL9 900 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 DNAJB14Q8TBM8 379 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 OR1E3Q8WZA6 343 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 GLYATL1Q969I3 302 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 TSACCQ96A04 125 aaPredicted RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 MOCOSQ96EN8 888 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 VPS39Q96JC1 886 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 SH3GL2Q99962 352 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 APOOQ9BUR5 198 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 SYNDIG1Q9H7V2 258 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 TMBIM4Q9HC24 238 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 SMOXQ9NWM0 555 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 ELOVL5Q9NYP7 299 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 PKD2L2Q9NZM6 624 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 CPNE7Q9UBL6 633 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 CIDEBQ9UHD4 219 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 ERRFI1Q9UJM3 462 aaPredicted RBP3.46□□□□□ -1.85
SCFD1-204ENST00000463622 EMCNQ9ULC0 261 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 PKP3Q9Y446 797 aa3.46□□□□□ -1.85
SCFD1-204ENST00000463622 APCP25054 2843 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 PDZD2O15018 2839 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CSMD1Q96PZ7 3565 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 A0A1W2PQ67 120 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 MAGEB16A2A368 324 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 EFCAB7A8K855 629 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 MKRN2OSH3BPM6 223 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SPAG7O75391 227 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 ERLIN1O75477 346 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SORBS2O94875 1100 aaKnown RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 TSPAN12O95859 305 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 HOXC4P09017 264 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-204ENST00000463622 GSTA2P09210 222 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 SLC35E2BP0CK96 405 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 PRKAR1AP10644 381 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 CTSEP14091 401 aa3.46□□□□□ -1.86
SCFD1-204ENST00000463622 OGNP20774 298 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms