RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KCNC2Q96PR1 638 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 ZNF300Q96RE9 604 aaPredicted RBP19.19■□□□□ 0.66
CCM2-203ENST00000461377 ASB4Q9Y574 426 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 LYVE1Q9Y5Y7 322 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 JUNBP17275 347 aaPredicted RBP19.19■□□□□ 0.66
CCM2-203ENST00000461377 AKT2P31751 481 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 TTKP33981 857 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 YPEL5P62699 121 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 SPDYE7PQ495Y7 208 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 PAQR7Q86WK9 346 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 ARMC8Q8IUR7 673 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 ATG16L2Q8NAA4 619 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 GEMIN6Q8WXD5 167 aaKnown RBP19.19■□□□□ 0.66
CCM2-203ENST00000461377 KRT84Q9NSB2 600 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 BLOC1S6Q9UL45 172 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 KLHL20Q9Y2M5 609 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 TESMINQ9Y4I5 508 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 HSPE1-MOB4S4R3N1 261 aa19.19■□□□□ 0.66
CCM2-203ENST00000461377 ZNF701M0R085 212 aaPredicted RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 TNFRSF11BO00300 401 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 BTN3A3O00478 584 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 PRAMEF10O60809 474 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 ABCB7O75027 752 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 RASGRP1O95267 797 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 AGXTP21549 392 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 ATP5A1P25705 553 aaKnown RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 BMP8BP34820 402 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 SLC19A1P41440 591 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 OR1E2P47887 323 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 SRP54P61011 504 aaKnown RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 IL1RL1Q01638 556 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 SLAMF1Q13291 335 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 SIM2Q14190 667 aaPredicted RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 RAB39AQ14964 217 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 ALG11Q2TAA5 492 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 TNFAIP8L2Q6P589 184 aaPredicted RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 CLVS1Q8IUQ0 354 aaPredicted RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 TTC29Q8NA56 475 aaPredicted RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 OR4C15Q8NGM1 316 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 OR8K5Q8NH50 307 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 TUBA1CQ9BQE3 449 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 TWSG1Q9GZX9 223 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 GLIPR2Q9H4G4 154 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 SLC35C2Q9NQQ7 365 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 APOBEC3BQ9UH17 382 aaKnown RBP19.18■□□□□ 0.66
CCM2-203ENST00000461377 RAB23Q9ULC3 237 aa19.18■□□□□ 0.66
CCM2-203ENST00000461377 XIRP2A4UGR9 3374 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 E9PQ18 207 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 H3BQ06 376 aaPredicted RBP19.17■□□□□ 0.66
CCM2-203ENST00000461377 SLC1A7O00341 560 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 MAN2B1O00754 1011 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 CYP4B1P13584 511 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 GLULP15104 373 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 ITGA2P17301 1181 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 PCSK6P29122 969 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 CCT3P49368 545 aaKnown RBP19.17■□□□□ 0.66
CCM2-203ENST00000461377 CDK5R2Q13319 367 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 ACOT4Q8N9L9 421 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 SLC38A5Q8WUX1 472 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 ZNF566Q969W8 418 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 AMDHD1Q96NU7 426 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 CXorf21Q9HAI6 301 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 EXD2Q9NVH0 621 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 EBF1Q9UH73 591 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 NDRG4Q9ULP0 352 aaKnown RBP19.17■□□□□ 0.66
CCM2-203ENST00000461377 DNAJB5O75953 348 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 F3P13726 295 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 TSFMP43897 325 aaKnown RBP19.17■□□□□ 0.66
CCM2-203ENST00000461377 IL5RAQ01344 420 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 NEDD8Q15843 81 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 NRROSQ86YC3 692 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 SRFBP1Q8NEF9 429 aaKnown RBP19.17■□□□□ 0.66
CCM2-203ENST00000461377 SRMSQ9H3Y6 488 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 TRNAU1APQ9NX07 287 aaKnown RBP19.17■□□□□ 0.66
CCM2-203ENST00000461377 ZSCAN32Q9NX65 697 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 USP36Q9P275 1121 aaKnown RBP19.17■□□□□ 0.66
CCM2-203ENST00000461377 HS3ST3A1Q9Y663 406 aa19.17■□□□□ 0.66
CCM2-203ENST00000461377 A0A1W2PR48 441 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 C5orf58C9J3I9 102 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 HMGN4O00479 90 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 GUCY1B2O75343 617 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 PRKRAO75569 313 aaKnown RBP19.16■□□□□ 0.66
CCM2-203ENST00000461377 SEMA4FO95754 770 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 BCHEP06276 602 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 TFPTP0C1Z6 253 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 CCDC159P0C7I6 412 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 XCR1P46094 333 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 SMYD1Q8NB12 490 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 FLVCR1-AS1Q8TAF5 88 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 GIPC3Q8TF64 312 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 HMGB4Q8WW32 186 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 FAM3CQ92520 227 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 SGCDQ92629 289 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 ISOC1Q96CN7 298 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 TMEM19Q96HH6 336 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 PITX2Q99697 317 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 SERHL2Q9H4I8 314 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 ATG4BQ9Y4P1 393 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 PCDHGA2Q9Y5H1 932 aa19.16■□□□□ 0.66
CCM2-203ENST00000461377 GMPPBQ9Y5P6 360 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms