RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ZNF700Q9H0M5 742 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 EML4Q9HC35 981 aaKnown RBP12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PRDM9Q9NQV7 894 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PRTFDC1Q9NRG1 225 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PHF11Q9UIL8 331 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ZNF225Q9UK10 706 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ADAM29Q9UKF5 820 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SLC12A4Q9UP95 1085 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SLC5A6Q9Y289 635 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 DOCK10Q96BY6 2186 aa12.43□□□□□ -0.42
RAB11FIP3-207ENST00000461009 TRAV17A0A0B4J275 112 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 A0A1B0GTL3 188 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ARHGAP10A1A4S6 786 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 FAM227AF5H4B4 570 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 RTCAO00442 366 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PLPP1O14494 284 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 NPHS1O60500 1241 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SCELO95171 688 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ZWINTO95229 277 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 CPN2P22792 545 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BIKQ13323 160 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ESPL1Q14674 2120 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ABHD17BQ5VST6 288 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 RPUSD3Q6P087 351 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ZNF793Q6ZN11 406 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 HDXQ7Z353 690 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ANKRD37Q7Z713 158 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 GPR180Q86V85 440 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 NUDCD3Q8IVD9 361 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BCORP1Q8N888 145 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ST6GALNAC3Q8NDV1 305 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 OR1N1Q8NGS0 311 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PPP1R14CQ8TAE6 165 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 AGAP11Q8TF27 550 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 HAS2Q92819 552 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 LPAR4Q99677 370 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 GATA5Q9BWX5 397 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 DDX31Q9H8H2 851 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 WDR41Q9HAD4 459 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 LYARQ9NX58 379 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 KCMF1Q9P0J7 381 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ABI3Q9P2A4 366 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 FBXW2Q9UKT8 454 aa12.42□□□□□ -0.42
RAB11FIP3-207ENST00000461009 DOPEY2Q9Y3R5 2298 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SERTM1A2A2V5 107 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 OR2W5A6NFC9 320 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 CYR61O00622 381 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 CTNSO60931 367 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SEMA7AO75326 666 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 GUCY1B2O75343 617 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BPGMP07738 259 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 FAM58BPP0C7Q3 252 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 UROSP10746 265 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 NEFHP12036 1026 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 EDN3P14138 238 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BSGP35613 385 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SERPINB5P36952 375 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BUD31P41223 144 aaPredicted RBP12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BTG2P78543 158 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 GALNT1Q10472 559 aaPredicted RBP12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SLC13A2Q13183 592 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 INAQ16352 499 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 EXT1Q16394 746 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 C4orf17Q53FE4 359 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SFT2D3Q587I9 215 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 NUDT13Q86X67 352 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SIRT6Q8N6T7 355 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 FAM47BQ8NA70 645 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 FAR1Q8WVX9 515 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BARD1Q99728 777 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 MAPKAP1Q9BPZ7 522 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 TMBIM4Q9HC24 238 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 FARSBQ9NSD9 589 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 STMN3Q9NZ72 180 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 VPS29Q9UBQ0 182 aa12.41□□□□□ -0.42
RAB11FIP3-207ENST00000461009 RP1L1Q8IWN7 2480 aaPredicted RBP12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 HECTD1Q9ULT8 2610 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 UBFD1O14562 309 aaKnown RBP12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BIRC5O15392 142 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ETHE1O95571 254 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 CHEK2O96017 543 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 MAOAP21397 527 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PPP2R1BP30154 601 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ETV4P43268 484 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PER3P56645 1201 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 STX4Q12846 297 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SERTAD2Q14140 314 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 PCOLCEQ15113 449 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 BTBD16Q32M84 506 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 CCNYL2Q5T2Q4 361 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 LANCL3Q6ZV70 420 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 SHISA5Q8N114 240 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 METTL4Q8N3J2 472 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 GOLGA6L1Q8N7Z2 621 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 CATSPER1Q8NEC5 780 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 GRHL3Q8TE85 626 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 TANKQ92844 425 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 TSLPQ969D9 159 aa12.4□□□□□ -0.42
RAB11FIP3-207ENST00000461009 ZBTB9Q96C00 473 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms