RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 IL36AQ9UHA7 158 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 PILRBQ9UKJ0 227 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 MGAT4BQ9UQ53 548 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 TARBP1Q13395 1621 aaKnown RBP2.66□□□□□ -1.98
HPS3-203ENST00000460822 NINLQ9Y2I6 1382 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 PTPRGP23470 1445 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 SCAPERQ9BY12 1400 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 ANKRD50Q9ULJ7 1429 aa2.66□□□□□ -1.98
HPS3-203ENST00000460822 KDM5AP29375 1690 aaKnown RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 SHPRHQ149N8 1683 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 SAA2-SAA4A0A096LPE2 208 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 IGLV9-49A0A0B4J1Y8 123 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 MTMR11A4FU01 709 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 MAGEB3O15480 346 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 GRID2O43424 1007 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 NME2P1O60361 137 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 ZNF821O75541 412 aaPredicted RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 CPNE6O95741 557 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 KRT3P12035 628 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 ANPEPP15144 967 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 HLA-FP30511 346 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 OR1D2P34982 312 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 MAGEA11P43364 429 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 DVL1P1P54792 670 aaPredicted RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 GEMP55040 296 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 SSTP61278 116 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 SPIBQ01892 262 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 KIF5AQ12840 1032 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 CUL2Q13617 745 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 CEACAM7Q14002 265 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 PDIA5Q14554 519 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 EXT1Q16394 746 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 TMEM41BQ5BJD5 291 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 CEACAM20Q6UY09 585 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 SLC24A5Q71RS6 500 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 MISPQ8IVT2 679 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 CDH26Q8IXH8 852 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 OR56B2PQ8NGI1 322 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 OR10T2Q8NGX3 314 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 NEUROG1Q92886 237 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 NXPE2Q96DL1 559 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 MRPL53Q96EL3 112 aaKnown RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 ZNF665Q9H7R5 613 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 UPF2Q9HAU5 1272 aaKnown RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 VAT1LQ9HCJ6 419 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 YAE1D1Q9NRH1 226 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 FARSBQ9NSD9 589 aaKnown RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 ECHDC1Q9NTX5 307 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 ACOXLQ9NUZ1 547 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 CHMP5Q9NZZ3 219 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 PTBP2Q9UKA9 531 aaKnown RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 PILRAQ9UKJ1 303 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 SATB2Q9UPW6 733 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 ERVK-19Q9WJR5 959 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 MRPS2Q9Y399 296 aaKnown RBP2.65□□□□□ -1.98
HPS3-203ENST00000460822 ANKRD30AQ9BXX3 1397 aa2.65□□□□□ -1.98
HPS3-203ENST00000460822 PIK3C2GO75747 1445 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ERBINQ96RT1 1412 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 A2MP01023 1474 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 MAGI2Q86UL8 1455 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 WDR7Q9Y4E6 1490 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 GPATCH8Q9UKJ3 1502 aaKnown RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 UNC13BO14795 1591 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SPHKAPQ2M3C7 1700 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SNURFLB1AK76 121 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ATP6V0E1O15342 81 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 VPS26AO75436 327 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ADCY5O95622 1261 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 EPOP01588 193 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 RALAP11233 206 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 FGF5P12034 268 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 GNSP15586 552 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 PTPN4P29074 926 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 STIP1P31948 543 aaKnown RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 PRDX2P32119 198 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 TAGLN2P37802 199 aaKnown RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 HOXA1P49639 335 aaPredicted RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 HSF2Q03933 536 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 GBE1Q04446 702 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SPHARQ15513 63 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SLC36A3Q495N2 470 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 CCDC152Q4G0S7 254 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SPATA46Q5T0L3 261 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 LCN1P1Q5VSP4 162 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 LYPLAL1Q5VWZ2 237 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SLC27A4Q6P1M0 643 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 DHRS11Q6UWP2 260 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 TUBA1AQ71U36 451 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ISCA2Q86U28 154 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 ZNF679Q8IYX0 411 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 CENPLQ8N0S6 344 aaPredicted RBP2.65□□□□□ -1.99
HPS3-203ENST00000460822 CERS5Q8N5B7 392 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 BCORP1Q8N888 145 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 FADS6Q8N9I5 356 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 KBTBD3Q8NAB2 608 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SLC37A3Q8NCC5 494 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 OR4L1Q8NH43 312 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SECTM1Q8WVN6 248 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 SORCS1Q8WY21 1168 aa2.65□□□□□ -1.99
HPS3-203ENST00000460822 RTP4Q96DX8 246 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms