RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 PHOX2BQ99453 314 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MAPKAP1Q9BPZ7 522 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ANGPT4Q9Y264 503 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 KIF26AQ9ULI4 1882 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 CCDC88CQ9P219 2028 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 TRBC2A0A5B9 178 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 GPR89AB7ZAQ6 455 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 J3KTA2 159 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ZSCAN9O15535 394 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 B4GALT2O60909 372 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 GPR89BP0CG08 455 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 UGT2B7P16662 529 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 DDCP20711 480 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 HIST1H1TP22492 207 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PPIBP23284 216 aaKnown RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PPP2R1BP30154 601 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 HPCAP84074 193 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ERV3-1Q14264 604 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 GAS6Q14393 721 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 LTB4RQ15722 352 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 GPR19Q15760 415 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MEP1AQ16819 746 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ERICH5Q6P6B1 374 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ZNF793Q6ZN11 406 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 DEFB123Q8N688 67 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 OR5T3Q8NGG3 340 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.88□□□□□ -0.992e-6■■□□□ 11.5
NUDCD3-203ENST00000460110 DCUN1D5Q9BTE7 237 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 BHLHE41Q9C0J9 482 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ROGDIQ9GZN7 287 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 FBRSQ9HAH7 460 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PELI2Q9HAT8 420 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 CACYBPQ9HB71 228 aaKnown RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 SLAMF7Q9NQ25 335 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 KRT84Q9NSB2 600 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 TMEM184CQ9NVA4 438 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 OR6C2Q9NZP2 312 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 AP3M1Q9Y2T2 418 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 RP1L1Q8IWN7 2480 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 TNFRSF11BO00300 401 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 FRS3O43559 492 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 SCN2BO60939 215 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 DDX5P17844 614 aaKnown RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 BSGP35613 385 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 REEP5Q00765 189 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 NNATQ16517 81 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 LPAL2Q16609 132 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MPEG1Q2M385 716 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 LRIF1Q5T3J3 769 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 FRMPD2BQ6IN97 320 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 UGT2A3Q6UWM9 527 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 C16orf62Q7Z3J2 963 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 TMEM179BQ7Z7N9 219 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 C8orf59Q8N0T1 100 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 HORMAD2Q8N7B1 307 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 OR9A2Q8NGT5 310 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MIPOL1Q8TD10 442 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PHF10Q8WUB8 498 aaKnown RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 SLC22A18Q96BI1 424 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 C16orf58Q96GQ5 468 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 SLC35G5Q96KT7 338 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 CCDC115Q96NT0 180 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 CDX2Q99626 313 aaPredicted RBP8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 POLR1BQ9H9Y6 1135 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ZNF556Q9HAH1 456 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MYNNQ9NPC7 610 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 SLC35C2Q9NQQ7 365 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 PNPLA3Q9NST1 481 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 ASIC5Q9NY37 505 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 MAPRE3Q9UPY8 281 aa8.88□□□□□ -0.99
NUDCD3-203ENST00000460110 FAM227AF5H4B4 570 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 RNASET2O00584 256 aaKnown RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 CSNK2A2P19784 350 aaPredicted RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 TLX1P31314 330 aaPredicted RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 CAPGP40121 348 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 DCTP40126 519 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 MC3RP41968 323 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 BLKP51451 505 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 XKP51811 444 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 SYPL1Q16563 259 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 NADK2Q4G0N4 442 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 NKAIN2Q5VXU1 208 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 ZC3H14Q6PJT7 736 aaKnown RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 XKR5Q6UX68 686 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 Q6ZPB1 254 aaPredicted RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 CEP68Q76N32 757 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 PTOV1Q86YD1 416 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 ABTB1Q969K4 478 aaPredicted RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 SLC7A5P2Q9GIP4 190 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 KIR3DX1Q9H7L2 352 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 GORASP2Q9H8Y8 452 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 LIN28AQ9H9Z2 209 aaKnown RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 VCX3AQ9NNX9 186 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 THUMPD1Q9NXG2 353 aaKnown RBP8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 C3orf18Q9UK00 162 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 MAN2B2Q9Y2E5 1009 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 A0A1W2PR48 441 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 SLC9B1P1A6NJY1 282 aa8.87□□□□□ -0.99
NUDCD3-203ENST00000460110 H3BN98 237 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms