RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MOSPD1Q9UJG1 213 aa15.85■□□□□ 0.13
CCDC43-202ENST00000457422 PCDHGA2Q9Y5H1 932 aa15.85■□□□□ 0.13
CCDC43-202ENST00000457422 ATG2BQ96BY7 2078 aa15.85■□□□□ 0.13
CCDC43-202ENST00000457422 A0A0G2JN53 185 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 J3KTA2 159 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 RNGTTO60942 597 aaKnown RBP15.84■□□□□ 0.13
CCDC43-202ENST00000457422 BCAS1O75363 584 aaPredicted RBP15.84■□□□□ 0.13
CCDC43-202ENST00000457422 SERPIND1P05546 499 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 DRD2P14416 443 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 MASP1P48740 699 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 BNIP3Q12983 259 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 HSPB3Q12988 150 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 AQP6Q13520 282 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 CTF1Q16619 201 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 TNFAIP8L2Q6P589 184 aaPredicted RBP15.84■□□□□ 0.13
CCDC43-202ENST00000457422 C6orf120Q7Z4R8 191 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 FAM20CQ8IXL6 584 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 AMER3Q8N944 861 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 SLC38A5Q8WUX1 472 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 UBE2FQ969M7 185 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 EXOSC8Q96B26 276 aaKnown RBP15.84■□□□□ 0.13
CCDC43-202ENST00000457422 SCARF2Q96GP6 870 aaPredicted RBP15.84■□□□□ 0.13
CCDC43-202ENST00000457422 GABRG3Q99928 467 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 AICDAQ9GZX7 198 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 RASSF1Q9NS23 344 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 PLCXD1Q9NUJ7 323 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 RLIMQ9NVW2 624 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 EHD3Q9NZN3 535 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 KCND3Q9UK17 655 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 RNF6Q9Y252 685 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 SNX11Q9Y5W9 270 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 CCDC88CQ9P219 2028 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 TICRRQ7Z2Z1 1910 aa15.84■□□□□ 0.13
CCDC43-202ENST00000457422 LRIT2A6NDA9 550 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 OR52A4PA6NMU1 304 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 SCAMP1O15126 338 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 PRICKLE3O43900 615 aaPredicted RBP15.83■□□□□ 0.13
CCDC43-202ENST00000457422 FOXD2O60548 495 aaPredicted RBP15.83■□□□□ 0.13
CCDC43-202ENST00000457422 B4GALT2O60909 372 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 TFPTP0C1Z6 253 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 MAT2AP31153 395 aaKnown RBP15.83■□□□□ 0.13
CCDC43-202ENST00000457422 ZIC1Q15915 447 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 MOGQ16653 247 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 UAP1L1Q3KQV9 507 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 ADPRMQ3LIE5 342 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 RPS26P11Q5JNZ5 115 aaPredicted RBP15.83■□□□□ 0.13
CCDC43-202ENST00000457422 Q6ZPB1 254 aaPredicted RBP15.83■□□□□ 0.13
CCDC43-202ENST00000457422 OR52E1Q8NGJ3 308 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 UCN3Q969E3 161 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 TEFMQ96QE5 360 aaKnown RBP15.83■□□□□ 0.13
CCDC43-202ENST00000457422 SARGQ9BW04 601 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 FBRSQ9HAH7 460 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 SH3GLB1Q9Y371 365 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 HCN4Q9Y3Q4 1203 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 FAM32AQ9Y421 112 aaKnown RBP15.83■□□□□ 0.13
CCDC43-202ENST00000457422 GPSM3Q9Y4H4 160 aa15.83■□□□□ 0.13
CCDC43-202ENST00000457422 C5orf58C9J3I9 102 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 PPM1DO15297 605 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 STATHP02808 62 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 IFNW1P05000 195 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 BCHEP06276 602 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 MAP2K4P45985 399 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 GSSP48637 474 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 ARFIP1P53367 373 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 ABATP80404 500 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 KRT33BQ14525 404 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 DUSP7Q16829 419 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 ZNF829Q3KNS6 432 aaPredicted RBP15.83■□□□□ 0.12
CCDC43-202ENST00000457422 ATAT1Q5SQI0 421 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 P3H2Q8IVL5 708 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 PARP8Q8N3A8 854 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 YIPF6Q96EC8 236 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 TMEM19Q96HH6 336 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 NIPSNAP1Q9BPW8 284 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 APOOQ9BUR5 198 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 ACOT13Q9NPJ3 140 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 ZSCAN32Q9NX65 697 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 ENOPH1Q9UHY7 261 aa15.83■□□□□ 0.12
CCDC43-202ENST00000457422 PDZK1P1A8MUH7 402 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 CACNB4O00305 520 aaPredicted RBP15.82■□□□□ 0.12
CCDC43-202ENST00000457422 HMGN4O00479 90 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 MAN1A2O60476 641 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 PDE9AO76083 593 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 DNTTP04053 509 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 CBLP22681 906 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 NTSR1P30989 418 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 BCL6P41182 706 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 SSR2P43308 183 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 ADPRHP54922 357 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 SPCS2Q15005 226 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 SPDYE7PQ495Y7 208 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 TMEM196Q5HYL7 178 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 ZNF793Q6ZN11 406 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 RHOXF1Q8NHV9 184 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 DNASE1L2Q92874 299 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 BORCS5Q969J3 196 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 MRPL38Q96DV4 380 aaKnown RBP15.82■□□□□ 0.12
CCDC43-202ENST00000457422 DPH7Q9BTV6 452 aa15.82■□□□□ 0.12
CCDC43-202ENST00000457422 SLC6A20Q9NP91 592 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms