RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FAM58BPP0C7Q3 252 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 HSD3B1P14060 373 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 TSPAN8P19075 237 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 HSD3B2P26439 372 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 HNRNPFP52597 415 aaKnown RBP21.66■■□□□ 1.06
CBX3-204ENST00000456948 TNFRSF17Q02223 184 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 ASPHQ12797 758 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 ELOAQ14241 798 aaKnown RBP21.66■■□□□ 1.06
CBX3-204ENST00000456948 ERCC6LQ2NKX8 1250 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 LETMD1Q6P1Q0 360 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 FAM180AQ6UWF9 173 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 CRLF3Q8IUI8 442 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 CCNYL1Q8N7R7 359 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 MORN4Q8NDC4 146 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 TMEM52Q8NDY8 209 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 METTL6Q8TCB7 284 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 SORBS1Q9BX66 1292 aaKnown RBP21.66■■□□□ 1.06
CBX3-204ENST00000456948 CDCP1Q9H5V8 836 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 SLC12A4Q9UP95 1085 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 CSAG2Q9Y5P2 127 aa21.66■■□□□ 1.06
CBX3-204ENST00000456948 PRRC2CQ9Y520 2896 aaKnown RBP21.65■■□□□ 1.06
CBX3-204ENST00000456948 PRAMEF2O60811 474 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 LDB3O75112 727 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 ULK1O75385 1050 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 ZFAND5O76080 213 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 OR4F21O95013 312 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 CPA3P15088 417 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 CD46P15529 392 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 BSGP35613 385 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 OC90Q02509 493 aaPredicted RBP21.65■■□□□ 1.06
CBX3-204ENST00000456948 FCRLBQ6BAA4 426 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 SH2D5Q6ZV89 423 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 RPS27LQ71UM5 84 aaKnown RBP21.65■■□□□ 1.06
CBX3-204ENST00000456948 HOMEZQ8IX15 550 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 BEST3Q8N1M1 668 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 CDYL2Q8N8U2 506 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 NFAM1Q8NET5 270 aaPredicted RBP21.65■■□□□ 1.06
CBX3-204ENST00000456948 DGAT2Q96PD7 388 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 PELOQ9BRX2 385 aaKnown RBP21.65■■□□□ 1.06
CBX3-204ENST00000456948 PARD6BQ9BYG5 372 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 ASF1BQ9NVP2 202 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 COPS7AQ9UBW8 275 aa21.65■■□□□ 1.06
CBX3-204ENST00000456948 PPIEQ9UNP9 301 aaKnown RBP21.65■■□□□ 1.06
CBX3-204ENST00000456948 A0A0A6YYD5 115 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 TRBV11-1A0A0K0K1C0 115 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 PROM1O43490 865 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 PLIN3O60664 434 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 CRCPO75575 148 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 PDYNP01213 254 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 PROCP04070 461 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 NR2F6P10588 404 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 DNAJB13P59910 316 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 SLC18A2Q05940 514 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 CCNYL2Q5T2Q4 361 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 BCORP1Q8N888 145 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 GBP7Q8N8V2 638 aaPredicted RBP21.64■■□□□ 1.05
CBX3-204ENST00000456948 C5orf34Q96MH7 638 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 VPS29Q9UBQ0 182 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 ATG4BQ9Y4P1 393 aa21.64■■□□□ 1.05
CBX3-204ENST00000456948 CPAMD8Q8IZJ3 1885 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 GABRR3A8MPY1 467 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 C17orf105B2RV13 164 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 PPP6CO00743 305 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 EEDO75530 441 aaKnown RBP21.63■■□□□ 1.05
CBX3-204ENST00000456948 ETHE1O95571 254 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 ESRRBO95718 433 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 F10P00742 488 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 KLK1P06870 262 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 CYB561P49447 251 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 PLIN5Q00G26 463 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 PRR30Q53SZ7 412 aaPredicted RBP21.63■■□□□ 1.05
CBX3-204ENST00000456948 MRM1Q6IN84 353 aaKnown RBP21.63■■□□□ 1.05
CBX3-204ENST00000456948 C4orf33Q8N1A6 199 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 METTL4Q8N3J2 472 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 KIF2BQ8N4N8 673 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 MREGQ8N565 214 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 OR2W6PQ8NHA6 318 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 SREK1Q8WXA9 508 aaKnown RBP21.63■■□□□ 1.05
CBX3-204ENST00000456948 NCLNQ969V3 563 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 ART5Q96L15 291 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 LGALS13Q9UHV8 139 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 EMCNQ9ULC0 261 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 ASB4Q9Y574 426 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 PCDHGB6Q9Y5F9 930 aa21.63■■□□□ 1.05
CBX3-204ENST00000456948 G3V2L1 256 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 MANBAO00462 879 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 OR10H2O60403 315 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 RASAL1O95294 804 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 CRYABP02511 175 aaKnown RBP21.62■■□□□ 1.05
CBX3-204ENST00000456948 STT3AP46977 705 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 MAPK12P53778 367 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 HNRNPH2P55795 449 aaKnown RBP21.62■■□□□ 1.05
CBX3-204ENST00000456948 MLF1P58340 268 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 CSTF3Q12996 717 aaKnown RBP21.62■■□□□ 1.05
CBX3-204ENST00000456948 TUBA3CQ13748 450 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 ZNF766Q5HY98 468 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 TUBA3EQ6PEY2 450 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 HSDL2Q6YN16 418 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 TMEM178AQ8NBL3 297 aa21.62■■□□□ 1.05
CBX3-204ENST00000456948 APCDD1LQ8NCL9 501 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms