RNA–Protein interactions for RNA: ENST00000455263.6

TP53-206, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-206ENST00000455263 CDK9P50750 372 aaKnown RBP11.67□□□□□ -0.54
TP53-206ENST00000455263 PRKAG1P54619 331 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 Q8N9G6 341 aaPredicted RBP11.67□□□□□ -0.54
TP53-206ENST00000455263 OR5T3Q8NGG3 340 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 PIGKQ92643 395 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 GATA6Q92908 595 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 COL26A1Q96A83 441 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 CCDC3Q9BQI4 270 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 FAM192AQ9GZU8 254 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 GORASP2Q9H8Y8 452 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 ARMC1Q9NVT9 282 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 LRIT1Q9P2V4 623 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 ZNF282Q9UDV7 671 aaPredicted RBP11.67□□□□□ -0.54
TP53-206ENST00000455263 FAF1Q9UNN5 650 aaPredicted RBP11.67□□□□□ -0.54
TP53-206ENST00000455263 MAPRE3Q9UPY8 281 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 CELSR3Q9NYQ7 3312 aa11.67□□□□□ -0.54
TP53-206ENST00000455263 CASQ2O14958 399 aaPredicted RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 PROS1P07225 676 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 FASP25445 335 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 RPL3P39023 403 aaKnown RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 MVDP53602 400 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 DUSP2Q05923 314 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 LPAL2Q16609 132 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 VMACQ2NL98 169 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 SNAP47Q5SQN1 464 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 LYSMD4Q5XG99 296 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 TNFAIP8L2Q6P589 184 aaPredicted RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 SERPINA11Q86U17 422 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 ZZZ3Q8IYH5 903 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 ADCY4Q8NFM4 1077 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 MTERF3Q96E29 417 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 RNF103-CHMP3A0A140T963 221 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 RHPN2P1A8MT19 583 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 FAM220BPB1ANY3 271 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 GPIP06744 558 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 GPC1P35052 558 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 FASLGP48023 281 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 NCBP2P52298 156 aaKnown RBP eCLIP11.66□□□□□ -0.54
TP53-206ENST00000455263 IST1P53990 364 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 OR1D5P58170 312 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 ID2Q02363 134 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 SIGLEC14Q08ET2 396 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 FOXD4Q12950 439 aaPredicted RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 TP53BP2Q13625 1128 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 SPDYE7PQ495Y7 208 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 CYP27C1Q4G0S4 372 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 ERMP1Q7Z2K6 904 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 VTCN1Q7Z7D3 282 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 PDSS2Q86YH6 399 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 ZC3H7AQ8IWR0 971 aaKnown RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 TRIML2Q8N7C3 387 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 TNIP2Q8NFZ5 429 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 OR2I1PQ8NGU4 316 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 RAB8BQ92930 207 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 CNRIP1Q96F85 164 aaPredicted RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 VPS50Q96JG6 964 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 BBS4Q96RK4 519 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 MUC13Q9H3R2 512 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 GLIPR2Q9H4G4 154 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 ADAM29Q9UKF5 820 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 POMT2Q9UKY4 750 aa11.66□□□□□ -0.54
TP53-206ENST00000455263 MAGED1Q9Y5V3 778 aaPredicted RBP11.66□□□□□ -0.54
TP53-206ENST00000455263 NINQ8N4C6 2090 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 HNRNPRO43390 633 aaKnown RBP11.65□□□□□ -0.54
TP53-206ENST00000455263 PROM1O43490 865 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 HRO43593 1189 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 B4GALT2O60909 372 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 OPN1SWP03999 348 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 PRIM2P49643 509 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 PCBP4P57723 403 aaKnown RBP11.65□□□□□ -0.54
TP53-206ENST00000455263 SIM1P81133 766 aaPredicted RBP11.65□□□□□ -0.54
TP53-206ENST00000455263 BNC1Q01954 994 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 CHRNB3Q05901 458 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 RUNX2Q13950 521 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 SPIDRQ14159 915 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 ZBTB49Q6ZSB9 765 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 MAML2Q8IZL2 1156 aaPredicted RBP11.65□□□□□ -0.54
TP53-206ENST00000455263 CSNK1A1LQ8N752 337 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 SRFBP1Q8NEF9 429 aaKnown RBP11.65□□□□□ -0.54
TP53-206ENST00000455263 TM4SF19Q96DZ7 209 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 DUS3LQ96G46 650 aaKnown RBP11.65□□□□□ -0.54
TP53-206ENST00000455263 TPD52L3Q96J77 140 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 CSF3RQ99062 836 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 YIPF4Q9BSR8 244 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 AGPAT4Q9NRZ5 378 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 DCAF13Q9NV06 445 aaKnown RBP11.65□□□□□ -0.54
TP53-206ENST00000455263 IRAK4Q9NWZ3 460 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 OAZ3Q9UMX2 235 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 RNF215Q9Y6U7 377 aa11.65□□□□□ -0.54
TP53-206ENST00000455263 IGHV5-51A0A0C4DH38 117 aa11.65□□□□□ -0.55
TP53-206ENST00000455263 FAM227AF5H4B4 570 aa11.65□□□□□ -0.55
TP53-206ENST00000455263 SOCS2O14508 198 aa11.65□□□□□ -0.55
TP53-206ENST00000455263 DIRAS1O95057 198 aa11.65□□□□□ -0.55
TP53-206ENST00000455263 ZCCHC18P0CG32 403 aa11.65□□□□□ -0.55
TP53-206ENST00000455263 SEPHS1P49903 392 aa11.65□□□□□ -0.55
TP53-206ENST00000455263 KCNAB1Q14722 419 aa11.65□□□□□ -0.55
TP53-206ENST00000455263 FAM98BQ52LJ0 330 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms