RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RASSF1Q9NS23 344 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ASIC3Q9UHC3 531 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZKSCAN5Q9Y2L8 839 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 YARS2Q9Y2Z4 477 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ATG4BQ9Y4P1 393 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MMACHCQ9Y4U1 282 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CLCA3PQ9Y6N3 262 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CUBNO60494 3623 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RTTNQ86VV8 2226 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRGV5A0A0B4J1U4 118 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM95CA0A1B0GW59 222 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LRIT2A6NDA9 550 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GLOD5A6NK44 160 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 A6NNC1 897 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WASHC1A8K0Z3 465 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KIAA1324LA8MWY0 1029 aaPredicted RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CYR61O00622 381 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 AQP7O14520 342 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 BCKDKO14874 412 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PHGDHO43175 533 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ATE1O95260 518 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 IGHG3P01860 377 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 P04436 131 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MLNP12872 115 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DNASE1P24855 282 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PCSK6P29122 969 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SOX18P35713 384 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HSPA7P48741 367 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 AP1S2P56377 157 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TAS2R39P59534 338 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 STXBP1P61764 594 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RNF4P78317 190 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MRPS25P82663 173 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 STX4Q12846 297 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DDX39BQ13838 428 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PPP1R7Q15435 360 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ACSF3Q4G176 576 aaPredicted RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FLYWCH1Q4VC44 716 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TMIGD1Q6UXZ0 262 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C4orf22Q6V702 233 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 UBE3DQ7Z6J8 389 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CNTN4Q8IWV2 1026 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PPIL6Q8IXY8 311 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ULK2Q8IYT8 1036 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PRR22Q8IZ63 422 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CIARTQ8N365 385 aaPredicted RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TBC1D19Q8N5T2 526 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MCUQ8NE86 351 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRPV3Q8NET8 790 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LINC01560Q8TB33 94 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PPWD1Q96BP3 646 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PIGQQ9BRB3 760 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM129AQ9BZQ8 928 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 REXO4Q9GZR2 422 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DDX47Q9H0S4 455 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 IL1RL2Q9HB29 575 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SACM1LQ9NTJ5 587 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WWOXQ9NZC7 414 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PPIEQ9UNP9 301 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC6A5Q9Y345 797 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 USF3Q68DE3 2245 aa5.52□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR14I1A6ND48 311 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C17orf51A8MQB3 221 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PGRMC1O00264 195 aaKnown RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TAPBPO15533 448 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ENO2P09104 434 aaPredicted RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PCNAP12004 261 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EPORP19235 508 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TNNI3P19429 210 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GDF1P27539 372 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CDC25BP30305 580 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ELK3P41970 407 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MSH2P43246 934 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SSR2P43308 183 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC6A12P48065 614 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ASCL1P50553 236 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF136P52737 540 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MTTPP55157 894 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HSD17B7P56937 341 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FBXW4P57775 412 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HERVK_113P63132 956 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ERVK-8P63133 956 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KEAP1Q14145 624 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PCBP2Q15366 365 aaKnown RBP eCLIP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR4D1Q15615 310 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC25A35Q3KQZ1 300 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SPANXN3Q5MJ09 141 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WLSQ5T9L3 541 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TEDDM1Q5T9Z0 273 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NDUFAF5Q5TEU4 345 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DESI1Q6ICB0 168 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM45BPQ6NSW5 357 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIM40Q6P9F5 258 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ABHD17CQ6PCB6 329 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 POMZP3Q6PJE2 187 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LYPD8Q6UX82 237 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TAOK1Q7L7X3 1001 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZC3HC1Q86WB0 502 aaKnown RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PRIMA1Q86XR5 153 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms