RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 MYO7AQ13402 2215 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 FGFBP1Q14512 234 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 BHLHB9Q6PI77 547 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 FAM124AQ86V42 546 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 DNAJC5GQ8N7S2 189 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 C7orf34Q96L11 122 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 FCRL4Q96PJ5 515 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 LYRM1O43325 122 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 SGTAO43765 313 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 OAZ2O95190 189 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 CR2P20023 1033 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 PAICSP22234 425 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 PPP2R1BP30154 601 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 SSX1Q16384 188 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 RTP2Q5QGT7 225 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 BCL2L15Q5TBC7 163 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 TXNDC8Q6A555 127 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 XKRXQ6PP77 449 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 PLEKHM3Q6ZWE6 761 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 OPALINQ96PE5 141 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 DPCDQ9BVM2 203 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 SORBS1Q9BX66 1292 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 EIF3KQ9UBQ5 218 aaKnown RBP13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 CENPFP49454 3210 aa13.25□□□□□ -0.29
UBE2D3-210ENST00000453744 CPN2P22792 545 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 RPA4Q13156 261 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 KCNA10Q16322 511 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 ANKRD54Q6NXT1 300 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 Q6ZVL8 140 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 OLIG3Q7RTU3 272 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 IQCHQ86VS3 1027 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 PHC2Q8IXK0 858 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 OXR1Q8N573 874 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 OR52E4Q8NGH9 312 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 OR52P1PQ8NH57 321 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 ATP1B2P14415 290 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 ENDOUP21128 410 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 PCGF2P35227 344 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 PSPHP78330 225 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 EIF4EBP2Q13542 120 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 POU4F3Q15319 338 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 FAM205BPQ63HN1 556 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 WBP2Q969T9 261 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 MAP6Q96JE9 813 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 REEP4Q9H6H4 257 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 C3orf14Q9HBI5 128 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 EQTNQ9NQ60 294 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 EXTL2Q9UBQ6 330 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 TMPRSS11EQ9UL52 423 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 YY2O15391 372 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC16A8O95907 504 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 CSF3P09919 207 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 SRCP12931 536 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 MAGEA11P43364 429 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 RFX2P48378 723 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 RFX3P48380 749 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF81P51508 661 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 DUSP7Q16829 419 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 CFAP206Q8IYR0 622 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 OR7G3Q8NG95 312 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 NEIL3Q8TAT5 605 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 MCCC1Q96RQ3 725 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 PKMYT1Q99640 499 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 HHATLQ9HCP6 504 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 NDRG2Q9UN36 371 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 NCKAP1Q9Y2A7 1128 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 CCDC88CQ9P219 2028 aa13.24□□□□□ -0.29
UBE2D3-210ENST00000453744 SSTR2P30874 369 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 TIA1P31483 386 aaKnown RBP eCLIP13.23□□□□□ -0.297e-7■■■□□ 15.5
UBE2D3-210ENST00000453744 KIR2DL3P43628 341 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF157P51786 506 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 GPR17Q13304 367 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 ABI3BPQ7Z7G0 1075 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 DDX53Q86TM3 631 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 OR8J1Q8NGP2 316 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 PTPN18Q99952 460 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC12A9Q9BXP2 914 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 GABARAPL3Q9BY60 117 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 NPAP1Q9NZP6 1156 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 LOC105369274A0A096LPK9 316 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 IL1RNP18510 177 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 GZMMP51124 257 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 RPS25P62851 125 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF763Q0D2J5 394 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 MAP4K2Q12851 820 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 ZNF791Q3KP31 576 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 CCSMST1Q4G0I0 132 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 MRPL10Q7Z7H8 261 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SERINC5Q86VE9 423 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 OR4N4Q8N0Y3 316 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 GDPD1Q8N9F7 314 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 MYLIPQ8WY64 445 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SLC38A2Q96QD8 506 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 SRRQ9GZT4 340 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 PLCXD1Q9NUJ7 323 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 B4GALT6Q9UBX8 382 aa13.23□□□□□ -0.29
UBE2D3-210ENST00000453744 CACNA1CQ13936 2221 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms