RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 NDUFV3P56181 108 aaKnown RBP3.29□□□□□ -1.88
VPS8-211ENST00000452140 ITPK1Q13572 414 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 LY6DQ14210 128 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 ZNF146Q15072 292 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 FCN2Q15485 313 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 UPP1Q16831 310 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 ECSCRQ19T08 205 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 EPC2Q52LR7 807 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 TRIM65Q6PJ69 517 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 GSG1LQ6UXU4 331 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 FAM131BQ86XD5 332 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 RTL3Q8N8U3 475 aaKnown RBP3.29□□□□□ -1.88
VPS8-211ENST00000452140 SIDT2Q8NBJ9 832 aaKnown RBP3.29□□□□□ -1.88
VPS8-211ENST00000452140 SPPL2AQ8TCT8 520 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 SSC4DQ8WTU2 575 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.29□□□□□ -1.88
VPS8-211ENST00000452140 GTF3AQ92664 365 aaKnown RBP3.29□□□□□ -1.88
VPS8-211ENST00000452140 S1PR3Q99500 378 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 TRIM51Q9BSJ1 452 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 LRRC61Q9BV99 259 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 FUNDC2Q9BWH2 189 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 CARD9Q9H257 536 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 MARCH7Q9H992 704 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 WDR41Q9HAD4 459 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 KCNMB3Q9NPA1 279 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 COMMD8Q9NX08 183 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 MUTYHQ9UIF7 546 aa3.29□□□□□ -1.88
VPS8-211ENST00000452140 UMODL1Q5DID0 1318 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 IGHV4-30-2A0A087WSY4 118 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 IQCMA0A1B0GVH7 501 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 LOC390937A0A1W2PQ73 354 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 MACROD2A1Z1Q3 448 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 ASB14A6NK59 587 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 EPM2AB3EWF7 344 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 DCXO43602 365 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 ZBTB14O43829 449 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 HSF2BPO75031 334 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 CT45A8P0DMV1 189 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 CT45A9P0DMV2 189 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 STIP1P31948 543 aaKnown RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 FCGR2BP31994 310 aaPredicted RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 FCGR2CP31995 323 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 ATP4BP51164 291 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 CCR4P51679 360 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 CNN1P51911 297 aaKnown RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 CASP9P55211 416 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 SRP54P61011 504 aaKnown RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 RPL27P61353 136 aaKnown RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 ERVK-16P61578 105 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 FKBP3Q00688 224 aaKnown RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 MFGE8Q08431 387 aaPredicted RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 CD300CQ08708 224 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 PPP1R8Q12972 351 aaKnown RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 MEF2DQ14814 521 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 OR1C1Q15619 314 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 MS4A18Q3C1V0 323 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 CT45A2Q5DJT8 189 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 Q6ZRG5 221 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 RABEPKQ7Z6M1 372 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 PARP8Q8N3A8 854 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 PRSS33Q8NF86 280 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 OR52E1Q8NGJ3 308 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 OR6F1Q8NGZ6 308 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 URGCPQ8TCY9 931 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 C11orf52Q96A22 123 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 RAB40CQ96S21 281 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 JPH2Q9BR39 696 aaPredicted RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 LIME1Q9H400 295 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 PIGVQ9NUD9 493 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 HMG20BQ9P0W2 317 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 UBQLN2Q9UHD9 624 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 TEKT2Q9UIF3 430 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 MOSPD1Q9UJG1 213 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 ZNF346Q9UL40 294 aaKnown RBP3.28□□□□□ -1.88
VPS8-211ENST00000452140 ABCC9O60706 1549 aa3.28□□□□□ -1.88
VPS8-211ENST00000452140 DHX29Q7Z478 1369 aaKnown RBP3.27□□□□□ -1.89
VPS8-211ENST00000452140 TRBV5-4A0A0C4DH59 114 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 ARHGEF33A8MVX0 844 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 A8MXK9 166 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 NEDD8-MDP1E9PL57 170 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 KIAA0513O60268 411 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 OR6A2O95222 327 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 POP4O95707 220 aaKnown RBP3.27□□□□□ -1.89
VPS8-211ENST00000452140 TXNDC12O95881 172 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 MMP10P09238 476 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 RNF224P0DH78 156 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 PCP11498 1178 aaKnown RBP3.27□□□□□ -1.89
VPS8-211ENST00000452140 CYP3A5P20815 502 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 CAPGP40121 348 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 MTIF2P46199 727 aaKnown RBP3.27□□□□□ -1.89
VPS8-211ENST00000452140 NSFP46459 744 aaKnown RBP3.27□□□□□ -1.89
VPS8-211ENST00000452140 TKTL1P51854 596 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 HNRNPFP52597 415 aaKnown RBP3.27□□□□□ -1.89
VPS8-211ENST00000452140 LIMK2P53671 638 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 KIF26BQ2KJY2 2108 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 GPAT3Q53EU6 434 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 TEX35Q5T0J7 233 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 RAB12Q6IQ22 244 aa3.27□□□□□ -1.89
VPS8-211ENST00000452140 C1orf186Q6ZWK4 172 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms