RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 NFKBIDQ8NI38 313 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 MSANTD3Q96H12 275 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 TSSK6Q9BXA6 273 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 GPATCH2Q9NW75 528 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 RPL36Q9Y3U8 105 aaKnown RBP16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 PRAMEF33A0A0G2JMD5 474 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 SCAMP2O15127 329 aaKnown RBP16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 LRRTM2O43300 516 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 PRAMEF10O60809 474 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 ATF4P18848 351 aaPredicted RBP16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 STK19P49842 368 aaPredicted RBP16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 PPP3R1P63098 170 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 GPR17Q13304 367 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 TMEM65Q6PI78 240 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 SOSTQ9BQB4 213 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 BTNL2Q9UIR0 455 aa16.39■□□□□ 0.21
SCUBE2-202ENST00000450649 FZD6O60353 706 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 HPGDSO60760 199 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 VNN2O95498 520 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 CD160O95971 181 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 ETV3P41162 512 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 ARF5P84085 180 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 NFATC2Q13469 925 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 SCARB2Q14108 478 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 IL18Q14116 193 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 SUZ12Q15022 739 aaKnown RBP16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 ANKS3Q6ZW76 656 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 SLC24A5Q71RS6 500 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 CHST9Q7L1S5 443 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 DENND1CQ8IV53 801 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 TAGAPQ8N103 731 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 VPS37AQ8NEZ2 397 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 ZNF431Q8TF32 576 aaPredicted RBP16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 GEMIN6Q8WXD5 167 aaKnown RBP16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 C1GALT1C1Q96EU7 318 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 TMEM43Q9BTV4 400 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 SPIN1Q9Y657 262 aaPredicted RBP16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 A0A1B0GVM2 712 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 ISM1B1AKI9 464 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 CPEP16870 476 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 AOAHP28039 575 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 MVDP53602 400 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 CYP4F8P98187 520 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 TMEM201Q5SNT2 666 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 SLC43A3Q8NBI5 491 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 OR4A15Q8NGL6 344 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 PHF21AQ96BD5 680 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 MED18Q9BUE0 208 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 SPNS1Q9H2V7 528 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 SLC22A14Q9Y267 594 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 CDH10Q9Y6N8 788 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 PIKFYVEQ9Y2I7 2098 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 DSPPQ9NZW4 1301 aa16.38■□□□□ 0.21
SCUBE2-202ENST00000450649 A8MUA0 341 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 ITPKAP23677 461 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 INPP1P49441 399 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 SGSHP51688 502 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 DDX39BQ13838 428 aaKnown RBP16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 POU4F3Q15319 338 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 SF3A2Q15428 464 aaKnown RBP16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 RNF219Q5W0B1 726 aaPredicted RBP16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 ZNF770Q6IQ21 691 aaPredicted RBP16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 LINGO4Q6UY18 593 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 C2orf69Q8N8R5 385 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 MTERF1Q99551 399 aaKnown RBP16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 VPS29Q9UBQ0 182 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 MGAT4AQ9UM21 535 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 USP34Q70CQ2 3546 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 CYBAP13498 195 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 ACRV1P26436 265 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 RPS25P62851 125 aaKnown RBP16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 DUSP4Q13115 394 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 TAF1CQ15572 869 aaPredicted RBP16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 ATAT1Q5SQI0 421 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 CDH24Q86UP0 819 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 DTX3Q8N9I9 347 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 GALNT11Q8NCW6 608 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 ENPP4Q9Y6X5 453 aa16.37■□□□□ 0.21
SCUBE2-202ENST00000450649 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 ASGR1P07306 291 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 AGFG1P52594 562 aaKnown RBP16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 ACSM2AQ08AH3 577 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 CHIT1Q13231 466 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 FCN2Q15485 313 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 CRTC2Q53ET0 693 aaPredicted RBP16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 KLHL22Q53GT1 634 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 GCNT6Q5T4J0 391 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 ACSM2BQ68CK6 577 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 C17orf99Q6UX52 265 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 MACC1Q6ZN28 852 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 UBE2R2Q712K3 238 aaPredicted RBP16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 TCEANCQ8N8B7 351 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 KCNJ15Q99712 375 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 GPR62Q9BZJ7 368 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 CWH43Q9H720 699 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 LHX3Q9UBR4 397 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 REV1Q9UBZ9 1251 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 ING4Q9UNL4 249 aa16.36■□□□□ 0.21
SCUBE2-202ENST00000450649 RUVBL1Q9Y265 456 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms