RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 ZBTB26Q9HCK0 441 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 DEPPQ9NTK1 212 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 PSD3Q9NYI0 1048 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 CPSF2Q9P2I0 782 aaKnown RBP11.48□□□□□ -0.57
MSH5-209ENST00000450148 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 MTRF1LQ9UGC7 380 aaKnown RBP11.48□□□□□ -0.57
MSH5-209ENST00000450148 SH3BGRL2Q9UJC5 107 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 ENTPD4Q9Y227 616 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 KLF13Q9Y2Y9 288 aaPredicted RBP11.48□□□□□ -0.57
MSH5-209ENST00000450148 YARS2Q9Y2Z4 477 aaKnown RBP11.48□□□□□ -0.57
MSH5-209ENST00000450148 RNF11Q9Y3C5 154 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 PCDHGA11Q9Y5H2 935 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 CLCA3PQ9Y6N3 262 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
MSH5-209ENST00000450148 A0A0A6YYD5 115 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 PINLYPA6NC86 204 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 C17orf105B2RV13 164 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 TMPRSS11DO60235 418 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 EEDO75530 441 aaKnown RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 PRKRAO75569 313 aaKnown RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 OR6B1O95007 311 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 MLYCDO95822 493 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 IGKV3-11P04433 115 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 SBK3P0C264 359 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 ZNF24P17028 368 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 SSR4P51571 173 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 NR0B1P51843 470 aaKnown RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 RNF4P78317 190 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 TNFRSF17Q02223 184 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 STX4Q12846 297 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 SLAMF1Q13291 335 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 CDSNQ15517 529 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 SP5Q6BEB4 398 aaPredicted RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 METTL2BQ6P1Q9 378 aaKnown RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 KLC3Q6P597 504 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 CEP128Q6ZU80 1094 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 MRGPRGQ86SM5 289 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 TICAM1Q8IUC6 712 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 OR4N5Q8IXE1 308 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 SLC34A3Q8N130 599 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 GHDCQ8N2G8 530 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 TMEM151AQ8N4L1 468 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 ZNF808Q8N4W9 903 aaPredicted RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 TMEM156Q8N614 296 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 ZFP62Q8NB50 900 aaPredicted RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 POGLUT1Q8NBL1 392 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 OR52B6Q8NGF0 335 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 OR8K3Q8NH51 312 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 DCAKDQ8WVC6 231 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 RGMAQ96B86 450 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 RASL10BQ96S79 203 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 FMO2Q99518 471 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 CCDC77Q9BR77 488 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 OR8D2Q9GZM6 311 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 ACTR8Q9H981 624 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 PLSCR2Q9NRY7 297 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 PPT2Q9UMR5 302 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 ATG4BQ9Y4P1 393 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 ASB4Q9Y574 426 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 ANGPTL3Q9Y5C1 460 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 NINQ8N4C6 2090 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 PHF3Q92576 2039 aaKnown RBP11.47□□□□□ -0.57
MSH5-209ENST00000450148 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
MSH5-209ENST00000450148 A0A1B0GTL3 188 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 WASHC1A8K0Z3 465 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 KLRC4-KLRK1H3BQV0 150 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 STX16-NPEPL1H3BU86 382 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 HRKO00198 91 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 WWP2O00308 870 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 STX16O14662 325 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 ADAM10O14672 748 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 PROM1O43490 865 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 PEX1O43933 1283 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 INHBAP08476 426 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 FREM3P0C091 2139 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 GCAP28676 217 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 PTGER1P34995 402 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 RFC3P40938 356 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 SOX3P41225 446 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 STT3AP46977 705 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 PIK3CGP48736 1102 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 SERPINB9P50453 376 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 NEK2P51955 445 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 GPR85P60893 370 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 TRAF3Q13114 568 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 CUL3Q13618 768 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 CPSF6Q16630 551 aaKnown RBP eCLIP11.46□□□□□ -0.57
MSH5-209ENST00000450148 GLE1Q53GS7 698 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 CMPK2Q5EBM0 449 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 MTFR2Q6P444 385 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 HSDL2Q6YN16 418 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 NCCRP1Q6ZVX7 275 aaPredicted RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 GPR180Q86V85 440 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 MYLK4Q86YV6 388 aaPredicted RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 GPALPP1Q8IXQ4 340 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 PTGR2Q8N8N7 351 aaPredicted RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 PSD4Q8NDX1 1056 aa11.46□□□□□ -0.57
MSH5-209ENST00000450148 SREK1Q8WXA9 508 aaKnown RBP11.46□□□□□ -0.57
MSH5-209ENST00000450148 IFT81Q8WYA0 676 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms