RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 BMP8AQ7Z5Y6 402 aa13.39□□□□□ -0.27
ITGB4-202ENST00000449880 PNLDC1Q8NA58 520 aaKnown RBP13.39□□□□□ -0.27
ITGB4-202ENST00000449880 AVL9Q8NBF6 648 aa13.39□□□□□ -0.27
ITGB4-202ENST00000449880 TSTD1Q8NFU3 115 aa13.39□□□□□ -0.27
ITGB4-202ENST00000449880 FCRL3Q96P31 734 aaPredicted RBP13.39□□□□□ -0.27
ITGB4-202ENST00000449880 MRPS30Q9NP92 439 aaKnown RBP13.39□□□□□ -0.27
ITGB4-202ENST00000449880 VILLO15195 856 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 SLC16A5O15375 505 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 EDIL3O43854 480 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 PAK4O96013 591 aaPredicted RBP13.38□□□□□ -0.27
ITGB4-202ENST00000449880 TFAP2AP05549 437 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 CA5AP35218 305 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 CLCN7P51798 805 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 MS4A2Q01362 244 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 PDGFRLQ15198 375 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 EXOC3L2Q2M3D2 409 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 OR8K5Q8NH50 307 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 SNX18Q96RF0 628 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 ZNF436Q9C0F3 470 aaPredicted RBP13.38□□□□□ -0.27
ITGB4-202ENST00000449880 SMOC2Q9H3U7 446 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 DIRAS1O95057 198 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 HTR1AP08908 422 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 UQCRC1P31930 480 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 INHBCP55103 352 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 CLDN10P78369 228 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 SNTB2Q13425 540 aaKnown RBP13.38□□□□□ -0.27
ITGB4-202ENST00000449880 GRB7Q14451 532 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 SLBPQ14493 270 aaKnown RBP eCLIP13.38□□□□□ -0.27
ITGB4-202ENST00000449880 GINS1Q14691 196 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 PON2Q15165 354 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 METTL11BQ5VVY1 283 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 LIPJQ5W064 366 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 PRSS55Q6UWB4 352 aaPredicted RBP13.38□□□□□ -0.27
ITGB4-202ENST00000449880 CCDC54Q8NEL0 328 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 ZFP90Q8TF47 636 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 GAL3ST3Q96A11 431 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 MROQ9BYG7 248 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 BIN3Q9NQY0 253 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
ITGB4-202ENST00000449880 ATE1O95260 518 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 ZNF20P17024 532 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 MAMDC4Q6UXC1 1216 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 OR6K6Q8NGW6 343 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 MCCC2Q9HCC0 563 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 KCNIP3Q9Y2W7 256 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 G3V2L1 256 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 CNMDO75829 334 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 CASRP41180 1078 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 FPGSQ05932 587 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 C22orf42Q6IC83 251 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 DNM1P34Q6PK57 102 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 TCEAL3Q969E4 200 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 RPL10LQ96L21 214 aaKnown RBP13.38□□□□□ -0.27
ITGB4-202ENST00000449880 EPYCQ99645 322 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 FN3KQ9H479 309 aa13.38□□□□□ -0.27
ITGB4-202ENST00000449880 SULT1C2O00338 296 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 EIF1AYO14602 144 aaKnown RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 GM2AP17900 193 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 CASP3P42574 277 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 EIF1AXP47813 144 aaKnown RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 GJA9P57773 515 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 THOC6Q86W42 341 aaKnown RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 WDTC1Q8N5D0 677 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 SUN3Q8TAQ9 357 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 ADAMTS19Q8TE59 1207 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 MUL1Q969V5 352 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 PTPN18Q99952 460 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 OARD1Q9Y530 152 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 TAF1P21675 1872 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 F5H0A9 414 aaPredicted RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 GMFGO60234 142 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 MAGEA6P43360 314 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 ZNF763Q0D2J5 394 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 SYNPOQ8N3V7 929 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 FTMTQ8N4E7 242 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 PMEPA1Q969W9 287 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 COQ10AQ96MF6 247 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 MRI1Q9BV20 369 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 REEP4Q9H6H4 257 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 PADI2Q9Y2J8 665 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 PCDHB11Q9Y5F2 797 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 CLUP10909 449 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 CAPZA1P52907 286 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 NRG3P56975 720 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 GPM6BQ13491 265 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 UBE2UQ5VVX9 321 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 YIPF7Q8N8F6 280 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 TMEM145Q8NBT3 493 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 FBXO15Q8NCQ5 510 aaPredicted RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 SH3RF2Q8TEC5 729 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 GATAD2BQ8WXI9 593 aa13.37□□□□□ -0.27
ITGB4-202ENST00000449880 CPNE2Q96FN4 548 aaPredicted RBP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.37□□□□□ -0.27
ITGB4-202ENST00000449880 MEIOCA2RUB1 952 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms