RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 POLR1BQ9H9Y6 1135 aa15.29■□□□□ 0.04
AP000253.1-201ENST00000449339 TEX10Q9NXF1 929 aaPredicted RBP15.29■□□□□ 0.04
AP000253.1-201ENST00000449339 ADAM29Q9UKF5 820 aa15.29■□□□□ 0.04
AP000253.1-201ENST00000449339 TRBC2A0A5B9 178 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 LRIT2A6NDA9 550 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 M0QX08 132 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 BCKDKO14874 412 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 F3P13726 295 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 PCSK6P29122 969 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 RABIFP47224 123 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 CCR5P51681 352 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 IL1RL1Q01638 556 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 PMS2P3Q13401 168 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 ELOAQ14241 798 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 CTU2Q2VPK5 515 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 C6orf141Q5SZD1 244 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 CWF19L1Q69YN2 538 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 OR4C11Q6IEV9 310 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 ZNF773Q6PK81 442 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 TEFMQ96QE5 360 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 EPS8L2Q9H6S3 715 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 NEUROD4Q9HD90 331 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 PCOLCE2Q9UKZ9 415 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 CHURC1-FNTBB4DL54 471 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 C4orf51C9J302 202 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 DDX5P17844 614 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 CD6P30203 668 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 SSR2P43308 183 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 GSTM5P46439 218 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 EIF2B5Q13144 721 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 IL18R1Q13478 541 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 CCDC80Q76M96 950 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 TSEN54Q7Z6J9 526 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 LZICQ8WZA0 190 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 UCN3Q969E3 161 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 EXOSC8Q96B26 276 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 SRMSQ9H3Y6 488 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 RIBC2Q9H4K1 309 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 TRNAU1APQ9NX07 287 aaKnown RBP15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 NDUFAF4Q9P032 175 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 KIF17Q9P2E2 1029 aa15.28■□□□□ 0.04
AP000253.1-201ENST00000449339 UGT2B11O75310 529 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 JRKO75564 520 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 C9P02748 559 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 THEGLP0DJG4 465 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 ARAFP10398 606 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 CYP4B1P13584 511 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 TNFRSF1BP20333 461 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 RRM2P31350 389 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 RYKP34925 604 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 RXRGP48443 463 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 PCBP4P57723 403 aaKnown RBP15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 DSTNP60981 165 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 ABATP80404 500 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 HSPB3Q12988 150 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 RAPSNQ13702 412 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 SIM2Q14190 667 aaPredicted RBP15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 RAB39AQ14964 217 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 CRB2Q5IJ48 1285 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 TRIM73Q86UV7 250 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 CLVS1Q8IUQ0 354 aaPredicted RBP15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 ATG16L2Q8NAA4 619 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 NEURL3Q96EH8 262 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 EPYCQ99645 322 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 CXorf21Q9HAI6 301 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 TMEM184CQ9NVA4 438 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 PCDHGB3Q9Y5G1 929 aa15.27■□□□□ 0.04
AP000253.1-201ENST00000449339 A0A0A6YYD5 115 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 TNFP01375 233 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 TTKP33981 857 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 FRKP42685 505 aaPredicted RBP15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 OR1E2P47887 323 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 PCBP3P57721 371 aaKnown RBP15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 ILF3Q12906 894 aaKnown RBP eCLIP15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 COL9A2Q14055 689 aaPredicted RBP15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 FZD2Q14332 565 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 NEDD8Q15843 81 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 TMEM35AQ53FP2 167 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 IFI44LQ53G44 452 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 BROXQ5VW32 411 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 SAXO2Q658L1 398 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 CEACAM20Q6UY09 585 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 ZBED6CLQ96FA7 236 aaPredicted RBP15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 ZNF764Q96H86 408 aaPredicted RBP15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 SLC6A18Q96N87 628 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 FCRL4Q96PJ5 515 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 ORAI3Q9BRQ5 295 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 EXD2Q9NVH0 621 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 BLOC1S6Q9UL45 172 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 ANGPT4Q9Y264 503 aa15.27■□□□□ 0.03
AP000253.1-201ENST00000449339 USP34Q70CQ2 3546 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 IGHV1OR15-9A0A0B4J2B8 117 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 FAM170BA6NMN3 283 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 KDM1AO60341 852 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 TRMUO75648 421 aaKnown RBP15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 IFNA14P01570 189 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 AGXTP21549 392 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 NDUFS1P28331 727 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 CMPK1P30085 196 aa15.26■□□□□ 0.03
AP000253.1-201ENST00000449339 RPS26P62854 115 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms