RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF607Q96SK3 696 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCT7Q99832 543 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 NACA2Q9H009 215 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 WDR76Q9H967 626 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 MARCH7Q9H992 704 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 UPF2Q9HAU5 1272 aaKnown RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CHST11Q9NPF2 352 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 DDX28Q9NUL7 540 aaKnown RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CHRNA9Q9UGM1 479 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 TEKT2Q9UIF3 430 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 NCKAP1Q9Y2A7 1128 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 NAALAD2Q9Y3Q0 740 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 NPC1L1Q9UHC9 1359 aa3.98□□□□□ -1.77
HMGB1P48-201ENST00000446155 CNTNAP2Q9UHC6 1331 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ANKRD61A6NGH8 418 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 C2orf81A6NN90 581 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 C2CD4DB7Z1M9 353 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 LGALS8O00214 317 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 PDXKO00764 312 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 CHEK1O14757 476 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 EPOP01588 193 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 SP1P08047 785 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 IGHV4-38-2P0DP08 117 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ODC1P11926 461 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ANPEPP15144 967 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ATP6V1C1P21283 382 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 FCARP24071 287 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 CCNCP24863 283 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 GJB2P29033 226 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR1D2P34982 312 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 CETN2P41208 172 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 GEMP55040 296 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 MAZP56270 477 aaKnown RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 NLRP11P59045 1033 aaKnown RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 GBE1Q04446 702 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 RFTN1Q14699 578 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 OPCMLQ14982 345 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZMYND11Q15326 602 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ANKRD55Q3KP44 614 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 FILIP1LQ4L180 1135 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 GPAT3Q53EU6 434 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 LRRC70Q7Z2Q7 622 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 CPEB2Q7Z5Q1 589 aaKnown RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZNF554Q86TJ5 538 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 YRDCQ86U90 279 aaKnown RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 GCNT2Q8N0V5 402 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 LRTM2Q8N967 370 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 OR1J1Q8NGS3 322 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 PHLDA1Q8WV24 401 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 NCLNQ969V3 563 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 MRPL53Q96EL3 112 aaKnown RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 PSKH2Q96QS6 385 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ZBTB18Q99592 522 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 RTP3Q9BQQ7 232 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 CBWD1Q9BRT8 395 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 UBAC1Q9BSL1 405 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 TBCDQ9BTW9 1192 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 NUSAP1Q9BXS6 441 aaKnown RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 GANQ9H2C0 597 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 VCX2Q9H322 139 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 DPEP2Q9H4A9 486 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 HPS4Q9NQG7 708 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 RBM28Q9NW13 759 aaKnown RBP3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ATG4BQ9Y4P1 393 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 ABCC10Q5T3U5 1492 aa3.97□□□□□ -1.77
HMGB1P48-201ENST00000446155 XKRY2A2RUG3 117 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 ZSCAN5BA6NJL1 495 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 TMEM110-MUSTN1A8MSY1 372 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 CPNE6O95741 557 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 CA3P07451 260 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 YES1P07947 543 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 GSTA2P09210 222 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 CT45A8P0DMV1 189 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 CT45A9P0DMV2 189 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 GP1BBP13224 206 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 LIFP15018 202 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 EZRP15311 586 aaKnown RBP3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 CALB2P22676 271 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 TMOD1P28289 359 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 CSTF2P33240 577 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC1A3P43003 542 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC6A8P48029 635 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 B3GALT5-AS1P59052 145 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 KRTAP10-9P60411 292 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SPHARQ15513 63 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 IMMTQ16891 758 aaKnown RBP3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 KCTD21Q4G0X4 260 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 CT45A2Q5DJT8 189 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC35D3Q5M8T2 416 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 HIST2H2AA3Q6FI13 130 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC35E4Q6ICL7 350 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC26A9Q7LBE3 791 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 TRMT1LQ7Z2T5 733 aaKnown RBP3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 COX8CQ7Z4L0 72 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 RCOR2Q8IZ40 523 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 EID3Q8N140 333 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 SLC43A2Q8N370 569 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 GPRC5AQ8NFJ5 357 aa3.96□□□□□ -1.78
HMGB1P48-201ENST00000446155 OR52N5Q8NH56 324 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms