RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 DDCP20711 480 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 PRPS1L1P21108 318 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 TACR1P25103 407 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 EMP2P54851 167 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 DIO3P55073 304 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 ACTN3Q08043 901 aaPredicted RBP12.4□□□□□ -0.42
TIMP1-204ENST00000445623 BIKQ13323 160 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 METTL21CQ5VZV1 264 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 C18orf63Q68DL7 685 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 FAM71E1Q6IPT2 247 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 SAMD14Q8IZD0 417 aaPredicted RBP12.4□□□□□ -0.42
TIMP1-204ENST00000445623 METTL21AQ8WXB1 218 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 MTERF3Q96E29 417 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 VPS50Q96JG6 964 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 ZBTB18Q99592 522 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 SPSB2Q99619 263 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 PRPF18Q99633 342 aaKnown RBP12.4□□□□□ -0.42
TIMP1-204ENST00000445623 DPY30Q9C005 99 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 SOX17Q9H6I2 414 aaPredicted RBP12.4□□□□□ -0.42
TIMP1-204ENST00000445623 LANCL2Q9NS86 450 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 SEMA3GQ9NS98 782 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 GIMAP4Q9NUV9 329 aa12.4□□□□□ -0.42
TIMP1-204ENST00000445623 IDSB3KWA1 339 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 FAM227AF5H4B4 570 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 RRP8O43159 456 aaKnown RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 TLX3O43711 291 aaPredicted RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 SNX3O60493 162 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 CTNSO60931 367 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 JRKO75564 520 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 KLF7O75840 302 aaPredicted RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 FAM107AO95990 144 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 ALDOCP09972 364 aaKnown RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 PIK3R1P27986 724 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 ATP4BP51164 291 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 CLNS1AP54105 237 aaKnown RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 CLDN8P56748 225 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 STX4Q12846 297 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 CLN3Q13286 438 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 SERTAD2Q14140 314 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 SQLEQ14534 574 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 PTGR1Q14914 329 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 TGIF1Q15583 401 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 PDCD4Q53EL6 469 aaKnown RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 TMEM198Q66K66 360 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 SLC48A1Q6P1K1 146 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 UNQ6494/PRO21346Q6UXR6 183 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 MIER2Q8N344 545 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 PLPP5Q8NEB5 264 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 CLHC1Q8NHS4 586 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 C10orf82Q8WW14 230 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 KLHL29Q96CT2 875 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 ZNF764Q96H86 408 aaPredicted RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 NAF1Q96HR8 494 aaKnown RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 PTCHD1Q96NR3 888 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 CATSPER2Q96P56 530 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 BRINP2Q9C0B6 783 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 VN1R1Q9GZP7 353 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 ACTL8Q9H568 366 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 RABEP2Q9H5N1 569 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 REEP4Q9H6H4 257 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 ATAD3AQ9NVI7 634 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 C19orf25Q9UFG5 118 aaPredicted RBP12.39□□□□□ -0.43
TIMP1-204ENST00000445623 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 C3orf18Q9UK00 162 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 UTS2RQ9UKP6 389 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 ENTPD4Q9Y227 616 aa12.39□□□□□ -0.43
TIMP1-204ENST00000445623 SCN2AQ99250 2005 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 TMEM8BA6NDV4 472 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 GLOD5A6NK44 160 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 TERTO14746 1132 aaKnown RBP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 SCAMP2O15127 329 aaKnown RBP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 AKAP10O43572 662 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 CNOT3O75175 753 aaKnown RBP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 ALOX12BO75342 701 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 PRKRAO75569 313 aaKnown RBP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 LRATO95237 230 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 FURINP09958 794 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 COX7A2P14406 83 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 LIFP15018 202 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 NCF2P19878 526 aaPredicted RBP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 C21orf58P58505 322 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 MC1RQ01726 317 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 RHAGQ02094 409 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 SF3A3Q12874 501 aaKnown RBP eCLIP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 SSPNQ14714 243 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 NSDHLQ15738 373 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 DPY19L1Q2PZI1 675 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 GKAP1Q5VSY0 366 aaPredicted RBP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 SHISA6Q6ZSJ9 500 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 CLNKQ7Z7G1 428 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 RAB43Q86YS6 212 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 TICAM1Q8IUC6 712 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 SCUBE1Q8IWY4 988 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 NATD1Q8N6N6 113 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 GLB1L3Q8NCI6 653 aaPredicted RBP12.38□□□□□ -0.43
TIMP1-204ENST00000445623 OR4K14Q8NGD5 310 aa12.38□□□□□ -0.43
TIMP1-204ENST00000445623 DNAJB14Q8TBM8 379 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms