RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 TEX28O15482 410 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 CLDN3O15551 220 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 ADAM12O43184 909 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 NOL3O60936 208 aaKnown RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 PEX11AO75192 247 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SAP30O75446 220 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 OR6A2O95222 327 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 TXNDC12O95881 172 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 IFNB1P01574 187 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 MT-ND2P03891 347 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 CHRNGP07510 517 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 MYOGP15173 224 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 B4GALT1P15291 398 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 GJB2P29033 226 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 NSFP46459 744 aaKnown RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SLC6A12P48065 614 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 PITPNBP48739 271 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 MYL7Q01449 175 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 CDH18Q13634 790 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 TRIM29Q14134 588 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 KARSQ15046 597 aaKnown RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SPHARQ15513 63 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 ANKDD1AQ495B1 522 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 WDR38Q5JTN6 314 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 RIPPLY2Q5TAB7 128 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SLC27A4Q6P1M0 643 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SLC25A47Q6Q0C1 308 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 CDHR3Q6ZTQ4 885 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 BTN2A1Q7KYR7 527 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 PPP1R42Q7Z4L9 355 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SMIM29Q86T20 159 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 ISCA2Q86U28 154 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 THEM5Q8N1Q8 247 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 TEX26Q8N6G2 289 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 GBP7Q8N8V2 638 aaPredicted RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 OR7A2PQ8NGA2 310 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 OR13C3Q8NGS6 347 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 GATAD1Q8WUU5 269 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 APOBEC4Q8WW27 367 aaKnown RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 ZNRF4Q8WWF5 429 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 RAB39BQ96DA2 213 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 MRPL53Q96EL3 112 aaKnown RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 RHNO1Q9BSD3 238 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 C1QTNF4Q9BXJ3 329 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 GANQ9H2C0 597 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 VIPAS39Q9H9C1 493 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 ANKMY1Q9P2S6 941 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 IL20RAQ9UHF4 553 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 FAM153AQ9UHL3 310 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SLC12A6Q9UHW9 1150 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 XPO7Q9UIA9 1087 aaKnown RBP3.55□□□□□ -1.84
LINC01004-201ENST00000445184 SATB2Q9UPW6 733 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 NUDCQ9Y266 331 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 NSG2Q9Y328 171 aa3.55□□□□□ -1.84
LINC01004-201ENST00000445184 A0A087WUV0 522 aaPredicted RBP3.54□□□□□ -1.84
LINC01004-201ENST00000445184 NKX6-3A6NJ46 265 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 FPGTO14772 594 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SPAG6O75602 509 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 DIRAS3O95661 229 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 NR3C1P04150 777 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SFTPBP07988 381 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 CETPP11597 493 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 GLRA1P23415 457 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 ITGA3P26006 1051 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 CETN2P41208 172 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 MAGEA4P43358 317 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SLC6A8P48029 635 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 DNA2P51530 1060 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 IRX4P78413 519 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 GALK2Q01415 458 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 PRKCEQ02156 737 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 DMTNQ08495 405 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 HSPA14Q0VDF9 509 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 ITGA9Q13797 1035 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 TAF1BQ53T94 588 aaPredicted RBP3.54□□□□□ -1.84
LINC01004-201ENST00000445184 IRAK1BP1Q5VVH5 260 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 RAET1GQ6H3X3 334 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SLC25A24Q6NUK1 477 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 IRGCQ6NXR0 463 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 MACC1Q6ZN28 852 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 MCM10Q7L590 875 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 C17orf64Q86WR6 236 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 CROCCP3Q8IVE0 287 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 CDK20Q8IZL9 346 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SLC43A2Q8N370 569 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 RFLNBQ8N5W9 214 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 METTL27Q8N6F8 245 aaPredicted RBP3.54□□□□□ -1.84
LINC01004-201ENST00000445184 FAM133AQ8N9E0 248 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SMYD1Q8NB12 490 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SLC37A3Q8NCC5 494 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 LMO3Q8TAP4 145 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SPATA18Q8TC71 538 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 U2AF1L4Q8WU68 220 aaKnown RBP3.54□□□□□ -1.84
LINC01004-201ENST00000445184 SECTM1Q8WVN6 248 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 METTL21AQ8WXB1 218 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 DYRK2Q92630 601 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 FRAT1Q92837 279 aaPredicted RBP3.54□□□□□ -1.84
LINC01004-201ENST00000445184 CASP10Q92851 521 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 NXPE2Q96DL1 559 aa3.54□□□□□ -1.84
LINC01004-201ENST00000445184 IGSF21Q96ID5 467 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms