RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TPST2O60704 377 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 NME6O75414 186 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 SCRG1O75711 98 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 SOX30O94993 753 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 IGHA2P01877 340 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 RORAP35398 523 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 CLDN8P56748 225 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 CDC73Q6P1J9 531 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 P4HA3Q7Z4N8 544 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 LMNTD1Q8N9Z9 388 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 OR7A2PQ8NGA2 310 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 SLC39A3Q9BRY0 314 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 ZDBF2Q9HCK1 2354 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 PTGES3LE9PB15 166 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 H0YGG7 62 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 OPN1SWP03999 348 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 MPLP40238 635 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 OR1D5P58170 312 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 ARF3P61204 181 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 ABHD17BQ5VST6 288 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 NKAIN2Q5VXU1 208 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 JAZF1Q86VZ6 243 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 TMEM151BQ8IW70 566 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 NFKBIDQ8NI38 313 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 MAP3K3Q99759 626 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 G6PC3Q9BUM1 346 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 KIR3DX1Q9H7L2 352 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 SLC35C2Q9NQQ7 365 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 CUTCQ9NTM9 273 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 BRINP1O60477 761 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 AHCYP23526 432 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 SOX6P35712 828 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 AHRP35869 848 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 METAP1P53582 386 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 BTBD16Q32M84 506 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 IKBIPQ70UQ0 350 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 VRK3Q8IV63 474 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 ZNF683Q8IZ20 524 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 DOK4Q8TEW6 326 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 BIRC8Q96P09 236 aa13.45□□□□□ -0.26
SMARCA4-204ENST00000444061 COL9A1P20849 921 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 EIF2B2P49770 351 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 INHBCP55103 352 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 PDSS1Q5T2R2 415 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SVOPQ8N4V2 548 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ACOT4Q8N9L9 421 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 APIPQ96GX9 242 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ALOXE3Q9BYJ1 711 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 KCNN2Q9H2S1 579 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 TAS2R1Q9NYW7 299 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 DKKL1Q9UK85 242 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 PTBP2Q9UKA9 531 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SHISA7A6NL88 538 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 BCAS2O75934 225 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ACVR1Q04771 509 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 MINDY1Q8N5J2 469 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 FRMD1Q8N878 549 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 UBXN10Q96LJ8 280 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SLC30A3Q99726 388 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 TUBA8Q9NY65 449 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SERGEFQ9UGK8 458 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 CAB39Q9Y376 341 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 NAALAD2Q9Y3Q0 740 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SEMA3DO95025 777 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 GADD45GO95257 159 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ANPEPP15144 967 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 HOXC12P31275 282 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ZNF41P51814 821 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 FLYWCH1Q4VC44 716 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 TMEM107Q6UX40 140 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 FAM220AQ7Z4H9 259 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 CLVS1Q8IUQ0 354 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 OR2L3Q8NG85 312 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ZFPM2Q8WW38 1151 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 CCDC74AQ96AQ1 378 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 DGCR14Q96DF8 476 aaKnown RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SH3YL1Q96HL8 342 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 OR6C1Q96RD1 312 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 GP1BBP13224 206 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ACADVLP49748 655 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 FAM91A1Q658Y4 838 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SHISA6Q6ZSJ9 500 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 PQLC1Q8N2U9 271 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 GAB3Q8WWW8 586 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 SLC25A36Q96CQ1 311 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 ZNF347Q96SE7 839 aa13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-204ENST00000444061 K7EQS6 105 aa13.43□□□□□ -0.26
SMARCA4-204ENST00000444061 FGF4P08620 206 aa13.43□□□□□ -0.26
SMARCA4-204ENST00000444061 GRIK2Q13002 908 aa13.43□□□□□ -0.26
SMARCA4-204ENST00000444061 PDK3Q15120 406 aa13.43□□□□□ -0.26
SMARCA4-204ENST00000444061 BROXQ5VW32 411 aa13.43□□□□□ -0.26
SMARCA4-204ENST00000444061 GRHL3Q8TE85 626 aa13.43□□□□□ -0.26
SMARCA4-204ENST00000444061 ZNF354BQ96LW1 612 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms